Task 98146670

Name	ebola_RdRp_v1_sidock_00300333_r1_s-24.0_0
Workunit	68743345
Created	26 Dec 2025, 8:31:21 UTC
Sent	26 Dec 2025, 11:40:46 UTC
Report deadline	30 Dec 2025, 11:40:46 UTC
Received	27 Dec 2025, 10:15:42 UTC
Server state	Over
Outcome	Success
Client state	Done
Exit status	0 (0x00000000)
Computer ID	54585
Run time	9 hours 36 min 21 sec
CPU time	9 hours 36 min 11 sec
Validate state	Valid
Credit	451.12
Device peak FLOPS	8.51 GFLOPS
Application version	CurieMarieDock 0.2.0 long tasks v2.02 x86_64-pc-linux-gnu
Peak working set size	238.50 MB
Peak swap size	245.66 MB
Peak disk usage	20.14 MB

Stderr output

<core_client_version>7.24.1</core_client_version>
<![CDATA[
<stderr_txt>
05:59:41 (1405732): wrapper (7.17.26016): starting
05:59:42 (1405732): wrapper (7.17.26016): starting
05:59:42 (1405732): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/14/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
free(): invalid pointer
SIGABRT: abort called
Stack trace (20 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c)[0x594b0e63ff8c]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x73940d645330]
/lib/x86_64-linux-gnu/libc.so.6(pthread_kill+0x11c)[0x73940d69eb2c]
/lib/x86_64-linux-gnu/libc.so.6(gsignal+0x1e)[0x73940d64527e]
/lib/x86_64-linux-gnu/libc.so.6(abort+0xdf)[0x73940d6288ff]
/lib/x86_64-linux-gnu/libc.so.6(+0x297b6)[0x73940d6297b6]
/lib/x86_64-linux-gnu/libc.so.6(+0xa8ff5)[0x73940d6a8ff5]
/lib/x86_64-linux-gnu/libc.so.6(+0xab38c)[0x73940d6ab38c]
/lib/x86_64-linux-gnu/libc.so.6(__libc_free+0x7e)[0x73940d6addae]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd)[0x594b0e65c3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4)[0x594b0e67b8e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x73940d645330]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0xbf)[0x73940d6ecadf]
/lib/x86_64-linux-gnu/libc.so.6(nanosleep+0x17)[0x73940d6f9a27]
/lib/x86_64-linux-gnu/libc.so.6(sleep+0x43)[0x73940d70ec93]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51a9a)[0x594b0e651a9a]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784)[0x594b0e61e784]
/lib/x86_64-linux-gnu/libc.so.6(+0x2a1ca)[0x73940d62a1ca]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x8b)[0x73940d62a28b]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a)[0x594b0e61aa3a]

Exiting...
11:01:21 (1447966): wrapper (7.17.26016): starting
11:01:21 (1447966): wrapper (7.17.26016): starting
11:01:21 (1447966): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/14/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
free(): invalid pointer
SIGABRT: abort called
Stack trace (20 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c)[0x64a2c683ff8c]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x77d8f8045330]
/lib/x86_64-linux-gnu/libc.so.6(pthread_kill+0x11c)[0x77d8f809eb2c]
/lib/x86_64-linux-gnu/libc.so.6(gsignal+0x1e)[0x77d8f804527e]
/lib/x86_64-linux-gnu/libc.so.6(abort+0xdf)[0x77d8f80288ff]
/lib/x86_64-linux-gnu/libc.so.6(+0x297b6)[0x77d8f80297b6]
/lib/x86_64-linux-gnu/libc.so.6(+0xa8ff5)[0x77d8f80a8ff5]
/lib/x86_64-linux-gnu/libc.so.6(+0xab38c)[0x77d8f80ab38c]
/lib/x86_64-linux-gnu/libc.so.6(__libc_free+0x7e)[0x77d8f80addae]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd)[0x64a2c685c3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4)[0x64a2c687b8e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x77d8f8045330]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0xbf)[0x77d8f80ecadf]
/lib/x86_64-linux-gnu/libc.so.6(nanosleep+0x17)[0x77d8f80f9a27]
/lib/x86_64-linux-gnu/libc.so.6(usleep+0x4c)[0x77d8f812975c]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf)[0x64a2c6851adf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784)[0x64a2c681e784]
/lib/x86_64-linux-gnu/libc.so.6(+0x2a1ca)[0x77d8f802a1ca]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x8b)[0x77d8f802a28b]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a)[0x64a2c681aa3a]

Exiting...
21:00:02 (1526206): wrapper (7.17.26016): starting
21:00:02 (1526206): wrapper (7.17.26016): starting
21:00:02 (1526206): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/14/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
04:15:31 (1526206): cmdock exited; CPU time 21125.430662
04:15:31 (1526206): called boinc_finish(0)

</stderr_txt>
]]>