Task 98150261

Name ebola_RdRp_v1_sidock_00301240_r1_s-24.0_0
Workunit 68746973
Created 26 Dec 2025, 8:34:38 UTC
Sent 26 Dec 2025, 16:57:48 UTC
Report deadline 30 Dec 2025, 16:57:48 UTC
Received 27 Dec 2025, 6:33:31 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 79628
Run time 4 hours 50 min 57 sec
CPU time 4 hours 50 min 53 sec
Validate state Valid
Credit 517.80
Device peak FLOPS 11.91 GFLOPS
Application version CurieMarieDock 0.2.0 long tasks v2.02
x86_64-pc-linux-gnu
Peak working set size 239.32 MB
Peak swap size 247.45 MB
Peak disk usage 20.35 MB

Stderr output

<core_client_version>7.24.1</core_client_version>
<![CDATA[
<stderr_txt>
11:58:54 (4027653): wrapper (7.17.26016): starting
11:58:54 (4027653): wrapper (7.17.26016): starting
11:58:54 (4027653): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/2/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
SIGSEGV: segmentation violation
Stack trace (14 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c)[0x571cf363ff8c]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x725f8ba45330]
/lib/x86_64-linux-gnu/libc.so.6(__libc_free+0x25)[0x725f8baadd55]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd)[0x571cf365c3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4)[0x571cf367b8e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x725f8ba45330]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0xbf)[0x725f8baecadf]
/lib/x86_64-linux-gnu/libc.so.6(nanosleep+0x17)[0x725f8baf9a27]
/lib/x86_64-linux-gnu/libc.so.6(usleep+0x4c)[0x725f8bb2975c]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf)[0x571cf3651adf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784)[0x571cf361e784]
/lib/x86_64-linux-gnu/libc.so.6(+0x2a1ca)[0x725f8ba2a1ca]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x8b)[0x725f8ba2a28b]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a)[0x571cf361aa3a]

Exiting...
23:50:05 (1133185): wrapper (7.17.26016): starting
23:50:05 (1133185): wrapper (7.17.26016): starting
23:50:05 (1133185): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/2/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
01:33:18 (1133185): cmdock exited; CPU time 3944.208843
01:33:18 (1133185): called boinc_finish(0)

</stderr_txt>
]]>


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