Task 98150509

Name ebola_RdRp_v1_sidock_00301298_r3_s-24.0_0
Workunit 68747207
Created 26 Dec 2025, 8:34:56 UTC
Sent 26 Dec 2025, 17:18:34 UTC
Report deadline 30 Dec 2025, 17:18:34 UTC
Received 27 Dec 2025, 1:52:47 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 26168
Run time 8 hours 24 min 34 sec
CPU time 8 hours 20 min 5 sec
Validate state Valid
Credit 528.85
Device peak FLOPS 6.20 GFLOPS
Application version CurieMarieDock 0.2.0 long tasks v2.02
x86_64-pc-linux-gnu
Peak working set size 238.56 MB
Peak swap size 244.74 MB
Peak disk usage 20.35 MB

Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
17:21:30 (20326): wrapper (7.17.26016): starting
17:21:30 (20326): wrapper (7.17.26016): starting
17:21:30 (20326): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc/slots/1/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
free(): invalid pointer
SIGABRT: abort called
Stack trace (20 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c)[0x557d05e3ff8c]
/lib64/libc.so.6(+0x3fc30)[0x7f1b5d03fc30]
/lib64/libc.so.6(+0x8d02c)[0x7f1b5d08d02c]
/lib64/libc.so.6(raise+0x16)[0x7f1b5d03fb86]
/lib64/libc.so.6(abort+0xd3)[0x7f1b5d029873]
/lib64/libc.so.6(+0x2a1b2)[0x7f1b5d02a1b2]
/lib64/libc.so.6(+0x970d7)[0x7f1b5d0970d7]
/lib64/libc.so.6(+0x9898c)[0x7f1b5d09898c]
/lib64/libc.so.6(free+0x55)[0x7f1b5d09b415]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd)[0x557d05e5c3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4)[0x557d05e7b8e4]
/lib64/libc.so.6(+0x3fc30)[0x7f1b5d03fc30]
/lib64/libc.so.6(clock_nanosleep+0x65)[0x7f1b5d0d5795]
/lib64/libc.so.6(__nanosleep+0x17)[0x7f1b5d0da247]
/lib64/libc.so.6(usleep+0x49)[0x7f1b5d1061d9]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf)[0x557d05e51adf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784)[0x557d05e1e784]
/lib64/libc.so.6(+0x2a610)[0x7f1b5d02a610]
/lib64/libc.so.6(__libc_start_main+0x80)[0x7f1b5d02a6c0]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a)[0x557d05e1aa3a]

Exiting...
17:54:26 (1940): wrapper (7.17.26016): starting
17:54:27 (1940): wrapper (7.17.26016): starting
17:54:27 (1940): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc/slots/1/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
01:52:36 (1940): cmdock exited; CPU time 28394.941472
01:52:36 (1940): called boinc_finish(0)

</stderr_txt>
]]>


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