Task 98575521

Name ebola_RdRp_v1_sidock_00365216_r4_s-24.0_1
Workunit 69002880
Created 10 Jan 2026, 8:08:22 UTC
Sent 11 Jan 2026, 15:58:05 UTC
Report deadline 15 Jan 2026, 15:58:05 UTC
Received 14 Jan 2026, 10:37:12 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 40324
Run time 14 hours 4 min 40 sec
CPU time 14 hours 0 min 1 sec
Validate state Valid
Credit 521.91
Device peak FLOPS 5.53 GFLOPS
Application version CurieMarieDock 0.2.0 long tasks v2.02
x86_64-pc-linux-gnu
Peak working set size 240.42 MB
Peak swap size 246.92 MB
Peak disk usage 20.09 MB

Stderr output

<core_client_version>7.16.6</core_client_version>
<![CDATA[
<stderr_txt>
18:58:10 (3772): wrapper (7.17.26016): starting
18:58:10 (3772): wrapper (7.17.26016): starting
18:58:10 (3772): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/3/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
SIGSEGV: segmentation violation
Stack trace (13 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c)[0x562a65c3ff8c]
/lib/x86_64-linux-gnu/libpthread.so.0(+0x14420)[0x7f3b2d7b1420]
/lib/x86_64-linux-gnu/libc.so.6(cfree+0x20)[0x7f3b2d6456f0]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd)[0x562a65c5c3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4)[0x562a65c7b8e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x43090)[0x7f3b2d5ee090]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0xdf)[0x7f3b2d68823f]
/lib/x86_64-linux-gnu/libc.so.6(nanosleep+0x17)[0x7f3b2d68dec7]
/lib/x86_64-linux-gnu/libc.so.6(usleep+0x4f)[0x7f3b2d6c0a7f]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf)[0x562a65c51adf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784)[0x562a65c1e784]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0xf3)[0x7f3b2d5cf083]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a)[0x562a65c1aa3a]

Exiting...
16:22:57 (1449): wrapper (7.17.26016): starting
16:22:57 (1449): wrapper (7.17.26016): starting
16:22:57 (1449): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/3/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
SIGSEGV: segmentation violation
Stack trace (13 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c)[0x56329003ff8c]
/lib/x86_64-linux-gnu/libpthread.so.0(+0x14420)[0x7fa4756d4420]
/lib/x86_64-linux-gnu/libc.so.6(cfree+0x20)[0x7fa4755686f0]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd)[0x56329005c3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4)[0x56329007b8e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x43090)[0x7fa475511090]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0xdf)[0x7fa4755ab23f]
/lib/x86_64-linux-gnu/libc.so.6(nanosleep+0x17)[0x7fa4755b0ec7]
/lib/x86_64-linux-gnu/libc.so.6(usleep+0x4f)[0x7fa4755e3a7f]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf)[0x563290051adf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784)[0x56329001e784]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0xf3)[0x7fa4754f2083]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a)[0x56329001aa3a]

Exiting...
21:25:34 (1904): wrapper (7.17.26016): starting
21:25:34 (1904): wrapper (7.17.26016): starting
21:25:34 (1904): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/3/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
SIGSEGV: segmentation violation
Stack trace (13 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c)[0x55cacf23ff8c]
/lib/x86_64-linux-gnu/libpthread.so.0(+0x14420)[0x7fd851f9a420]
/lib/x86_64-linux-gnu/libc.so.6(cfree+0x20)[0x7fd851e2e6f0]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd)[0x55cacf25c3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4)[0x55cacf27b8e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x43090)[0x7fd851dd7090]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0xdf)[0x7fd851e7123f]
/lib/x86_64-linux-gnu/libc.so.6(nanosleep+0x17)[0x7fd851e76ec7]
/lib/x86_64-linux-gnu/libc.so.6(usleep+0x4f)[0x7fd851ea9a7f]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf)[0x55cacf251adf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784)[0x55cacf21e784]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0xf3)[0x7fd851db8083]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a)[0x55cacf21aa3a]

Exiting...
09:33:33 (1874): wrapper (7.17.26016): starting
09:33:34 (1874): wrapper (7.17.26016): starting
09:33:34 (1874): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/3/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
13:36:57 (1874): cmdock exited; CPU time 10951.697687
13:36:57 (1874): called boinc_finish(0)

</stderr_txt>
]]>


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