Task 98576712

Name ebola_RdRp_v1_sidock_00369794_r3_s-24.0_1
Workunit 69021191
Created 11 Jan 2026, 0:47:44 UTC
Sent 11 Jan 2026, 16:50:41 UTC
Report deadline 15 Jan 2026, 16:50:41 UTC
Received 14 Jan 2026, 14:30:33 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 40324
Run time 14 hours 46 min 56 sec
CPU time 14 hours 41 min 34 sec
Validate state Valid
Credit 545.37
Device peak FLOPS 5.53 GFLOPS
Application version CurieMarieDock 0.2.0 long tasks v2.02
x86_64-pc-linux-gnu
Peak working set size 240.97 MB
Peak swap size 247.15 MB
Peak disk usage 20.24 MB

Stderr output

<core_client_version>7.16.6</core_client_version>
<![CDATA[
<stderr_txt>
19:50:46 (6198): wrapper (7.17.26016): starting
19:50:46 (6198): wrapper (7.17.26016): starting
19:50:46 (6198): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/1/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
SIGSEGV: segmentation violation
Stack trace (13 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c)[0x55a8cae3ff8c]
/lib/x86_64-linux-gnu/libpthread.so.0(+0x14420)[0x7f0f033e5420]
/lib/x86_64-linux-gnu/libc.so.6(cfree+0x20)[0x7f0f032796f0]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd)[0x55a8cae5c3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4)[0x55a8cae7b8e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x43090)[0x7f0f03222090]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0xdf)[0x7f0f032bc23f]
/lib/x86_64-linux-gnu/libc.so.6(nanosleep+0x17)[0x7f0f032c1ec7]
/lib/x86_64-linux-gnu/libc.so.6(usleep+0x4f)[0x7f0f032f4a7f]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf)[0x55a8cae51adf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784)[0x55a8cae1e784]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0xf3)[0x7f0f03203083]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a)[0x55a8cae1aa3a]

Exiting...
16:22:57 (1450): wrapper (7.17.26016): starting
16:22:57 (1450): wrapper (7.17.26016): starting
16:22:57 (1450): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/1/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
SIGSEGV: segmentation violation
Stack trace (13 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c)[0x55f86503ff8c]
/lib/x86_64-linux-gnu/libpthread.so.0(+0x14420)[0x7f4a2be06420]
/lib/x86_64-linux-gnu/libc.so.6(cfree+0x20)[0x7f4a2bc9a6f0]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd)[0x55f86505c3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4)[0x55f86507b8e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x43090)[0x7f4a2bc43090]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0xdf)[0x7f4a2bcdd23f]
/lib/x86_64-linux-gnu/libc.so.6(nanosleep+0x17)[0x7f4a2bce2ec7]
/lib/x86_64-linux-gnu/libc.so.6(usleep+0x4f)[0x7f4a2bd15a7f]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf)[0x55f865051adf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784)[0x55f86501e784]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0xf3)[0x7f4a2bc24083]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a)[0x55f86501aa3a]

Exiting...
21:25:34 (1906): wrapper (7.17.26016): starting
21:25:34 (1906): wrapper (7.17.26016): starting
21:25:34 (1906): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/1/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
SIGSEGV: segmentation violation
Stack trace (13 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c)[0x5615f5a3ff8c]
/lib/x86_64-linux-gnu/libpthread.so.0(+0x14420)[0x7fb82fe70420]
/lib/x86_64-linux-gnu/libc.so.6(cfree+0x20)[0x7fb82fd046f0]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd)[0x5615f5a5c3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4)[0x5615f5a7b8e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x43090)[0x7fb82fcad090]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0xdf)[0x7fb82fd4723f]
/lib/x86_64-linux-gnu/libc.so.6(nanosleep+0x17)[0x7fb82fd4cec7]
/lib/x86_64-linux-gnu/libc.so.6(usleep+0x4f)[0x7fb82fd7fa7f]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf)[0x5615f5a51adf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784)[0x5615f5a1e784]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0xf3)[0x7fb82fc8e083]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a)[0x5615f5a1aa3a]

Exiting...
09:33:33 (1875): wrapper (7.17.26016): starting
09:33:34 (1875): wrapper (7.17.26016): starting
09:33:34 (1875): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/1/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
SIGSEGV: segmentation violation
Stack trace (13 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c)[0x564d8cc3ff8c]
/lib/x86_64-linux-gnu/libpthread.so.0(+0x14420)[0x7fd04c11d420]
/lib/x86_64-linux-gnu/libc.so.6(cfree+0x20)[0x7fd04bfb16f0]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd)[0x564d8cc5c3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4)[0x564d8cc7b8e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x43090)[0x7fd04bf5a090]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0xdf)[0x7fd04bff423f]
/lib/x86_64-linux-gnu/libc.so.6(nanosleep+0x17)[0x7fd04bff9ec7]
/lib/x86_64-linux-gnu/libc.so.6(usleep+0x4f)[0x7fd04c02ca7f]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf)[0x564d8cc51adf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784)[0x564d8cc1e784]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0xf3)[0x7fd04bf3b083]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a)[0x564d8cc1aa3a]

Exiting...
17:09:36 (1886): wrapper (7.17.26016): starting
17:09:37 (1886): wrapper (7.17.26016): starting
17:09:37 (1886): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/1/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
17:30:20 (1886): cmdock exited; CPU time 916.127929
17:30:20 (1886): called boinc_finish(0)

</stderr_txt>
]]>


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