Task 98637536

Name ebola_RdRp_v1_sidock_00414833_r1_s-24.0_0
Workunit 69201345
Created 11 Jan 2026, 18:02:31 UTC
Sent 13 Jan 2026, 23:58:42 UTC
Report deadline 17 Jan 2026, 23:58:42 UTC
Received 15 Jan 2026, 4:56:51 UTC
Server state Over
Outcome Validate error
Client state Done
Exit status 0 (0x00000000)
Computer ID 81825
Run time 26 min 29 sec
CPU time 26 min 29 sec
Validate state Invalid
Credit 0.00
Device peak FLOPS 4.55 GFLOPS
Application version CurieMarieDock 0.2.0 long tasks v2.02
x86_64-pc-linux-gnu
Peak working set size 238.66 MB
Peak swap size 246.13 MB
Peak disk usage 20.09 MB

Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
13:36:34 (6086): wrapper (7.17.26016): starting
13:36:34 (6086): wrapper (7.17.26016): starting
13:36:34 (6086): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc/slots/19/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
free(): invalid pointer
SIGABRT: abort called
Stack trace (20 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c)[0x5d876843ff8c]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x74a7fbe45330]
/lib/x86_64-linux-gnu/libc.so.6(pthread_kill+0x11c)[0x74a7fbe9eb2c]
/lib/x86_64-linux-gnu/libc.so.6(gsignal+0x1e)[0x74a7fbe4527e]
/lib/x86_64-linux-gnu/libc.so.6(abort+0xdf)[0x74a7fbe288ff]
/lib/x86_64-linux-gnu/libc.so.6(+0x297b6)[0x74a7fbe297b6]
/lib/x86_64-linux-gnu/libc.so.6(+0xa8ff5)[0x74a7fbea8ff5]
/lib/x86_64-linux-gnu/libc.so.6(+0xab38c)[0x74a7fbeab38c]
/lib/x86_64-linux-gnu/libc.so.6(__libc_free+0x7e)[0x74a7fbeaddae]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd)[0x5d876845c3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4)[0x5d876847b8e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x74a7fbe45330]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0xbf)[0x74a7fbeecadf]
/lib/x86_64-linux-gnu/libc.so.6(nanosleep+0x17)[0x74a7fbef9a27]
/lib/x86_64-linux-gnu/libc.so.6(usleep+0x4c)[0x74a7fbf2975c]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf)[0x5d8768451adf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784)[0x5d876841e784]
/lib/x86_64-linux-gnu/libc.so.6(+0x2a1ca)[0x74a7fbe2a1ca]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x8b)[0x74a7fbe2a28b]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a)[0x5d876841aa3a]

Exiting...
17:20:39 (6321): wrapper (7.17.26016): starting
17:20:39 (6321): wrapper (7.17.26016): starting
17:20:39 (6321): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc/slots/19/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
21:33:05 (20018): wrapper (7.17.26016): starting
21:33:05 (20018): wrapper (7.17.26016): starting
21:33:05 (20018): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc/slots/19/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
22:33:12 (40189): wrapper (7.17.26016): starting
22:33:12 (40189): wrapper (7.17.26016): starting
22:33:12 (40189): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc/slots/19/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
05:55:53 (21058): wrapper (7.17.26016): starting
05:55:53 (21058): wrapper (7.17.26016): starting
05:55:54 (21058): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc/slots/19/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
05:56:24 (21058): cmdock exited; CPU time 2.897670
05:56:24 (21058): called boinc_finish(0)

</stderr_txt>
]]>


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