Task 98875838

Name ebola_RdRp_v1_sidock_00468528_r3_s-24.0_0
Workunit 69416127
Created 21 Jan 2026, 2:02:29 UTC
Sent 22 Jan 2026, 12:12:55 UTC
Report deadline 26 Jan 2026, 12:12:55 UTC
Received 23 Jan 2026, 2:41:05 UTC
Server state Over
Outcome Validate error
Client state Done
Exit status 0 (0x00000000)
Computer ID 60430
Run time 2 hours 6 min 12 sec
CPU time 2 hours 6 min 12 sec
Validate state Invalid
Credit 0.00
Device peak FLOPS 9.62 GFLOPS
Application version CurieMarieDock 0.2.0 long tasks v2.02
x86_64-pc-linux-gnu
Peak working set size 239.84 MB
Peak swap size 247.39 MB
Peak disk usage 20.20 MB

Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
06:27:03 (485953): wrapper (7.17.26016): starting
06:27:03 (485953): wrapper (7.17.26016): starting
06:27:03 (485953): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/19/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
free(): invalid pointer
SIGABRT: abort called
Stack trace (20 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c)[0x632a1763ff8c]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x72d9bf845330]
/lib/x86_64-linux-gnu/libc.so.6(pthread_kill+0x11c)[0x72d9bf89eb2c]
/lib/x86_64-linux-gnu/libc.so.6(gsignal+0x1e)[0x72d9bf84527e]
/lib/x86_64-linux-gnu/libc.so.6(abort+0xdf)[0x72d9bf8288ff]
/lib/x86_64-linux-gnu/libc.so.6(+0x297b6)[0x72d9bf8297b6]
/lib/x86_64-linux-gnu/libc.so.6(+0xa8ff5)[0x72d9bf8a8ff5]
/lib/x86_64-linux-gnu/libc.so.6(+0xab38c)[0x72d9bf8ab38c]
/lib/x86_64-linux-gnu/libc.so.6(__libc_free+0x7e)[0x72d9bf8addae]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd)[0x632a1765c3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4)[0x632a1767b8e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x72d9bf845330]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0xbf)[0x72d9bf8ecadf]
/lib/x86_64-linux-gnu/libc.so.6(nanosleep+0x17)[0x72d9bf8f9a27]
/lib/x86_64-linux-gnu/libc.so.6(usleep+0x4c)[0x72d9bf92975c]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf)[0x632a17651adf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784)[0x632a1761e784]
/lib/x86_64-linux-gnu/libc.so.6(+0x2a1ca)[0x72d9bf82a1ca]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x8b)[0x72d9bf82a28b]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a)[0x632a1761aa3a]

Exiting...
09:35:03 (508817): wrapper (7.17.26016): starting
09:35:03 (508817): wrapper (7.17.26016): starting
09:35:03 (508817): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/19/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
20:24:16 (2450): wrapper (7.17.26016): starting
20:24:16 (2450): wrapper (7.17.26016): starting
20:24:16 (2450): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/19/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
20:40:21 (2483): wrapper (7.17.26016): starting
20:40:21 (2483): wrapper (7.17.26016): starting
20:40:21 (2483): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/19/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
20:40:26 (2483): cmdock exited; CPU time 3.957025
20:40:26 (2483): called boinc_finish(0)

</stderr_txt>
]]>


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