Task 98931274

Name	ebola_RdRp_v1_sidock_00480267_r1_s-24.0_0
Workunit	69463081
Created	24 Jan 2026, 16:11:02 UTC
Sent	24 Jan 2026, 18:09:38 UTC
Report deadline	28 Jan 2026, 18:09:38 UTC
Received	25 Jan 2026, 10:48:32 UTC
Server state	Over
Outcome	Computation error
Client state	Aborted by user
Exit status	203 (0x000000CB) EXIT_ABORTED_VIA_GUI
Computer ID	82929
Run time	13 hours 49 min 22 sec
CPU time	13 hours 48 min 51 sec
Validate state	Invalid
Credit	0.00
Device peak FLOPS	1.00 GFLOPS
Application version	CurieMarieDock 0.2.0 long tasks v2.02 x86_64-pc-linux-gnu
Peak working set size	235.94 MB
Peak swap size	245.34 MB
Peak disk usage	20.24 MB
Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<message>
aborted by user</message>
<stderr_txt>
19:14:46 (2636571): wrapper (7.17.26016): starting
19:14:47 (2636571): wrapper (7.17.26016): starting
19:14:47 (2636571): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/10/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
07:24:17 (3763652): wrapper (7.17.26016): starting
07:24:18 (3763652): wrapper (7.17.26016): starting
07:24:18 (3763652): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/10/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
07:35:02 (3780696): wrapper (7.17.26016): starting
07:35:02 (3780696): wrapper (7.17.26016): starting
07:35:02 (3780696): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/10/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
07:38:45 (3786350): wrapper (7.17.26016): starting
07:38:45 (3786350): wrapper (7.17.26016): starting
07:38:45 (3786350): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/10/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
SIGSEGV: segmentation violation
Stack trace (16 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c) [0x5f6581e3ff8c]
/lib/x86_64-linux-gnu/libc.so.6(+0x3fdf0) [0x750c9d73cdf0]
/lib/x86_64-linux-gnu/libc.so.6(__libc_free+0x22) [0x750c9d7a0262]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd) [0x5f6581e5c3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4) [0x5f6581e7b8e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x3fdf0) [0x750c9d73cdf0]
/lib/x86_64-linux-gnu/libc.so.6(+0x9a9ee) [0x750c9d7979ee]
/lib/x86_64-linux-gnu/libc.so.6(+0x8f668) [0x750c9d78c668]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0x2a) [0x750c9d7d8f7a]
/lib/x86_64-linux-gnu/libc.so.6(nanosleep+0x13) [0x750c9d7e4393]
/lib/x86_64-linux-gnu/libc.so.6(usleep+0x43) [0x750c9d80d373]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf) [0x5f6581e51adf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784) [0x5f6581e1e784]
/lib/x86_64-linux-gnu/libc.so.6(+0x29ca8) [0x750c9d726ca8]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x85) [0x750c9d726d65]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a) [0x5f6581e1aa3a]

Exiting...
08:31:21 (3866440): wrapper (7.17.26016): starting
08:31:22 (3866440): wrapper (7.17.26016): starting
08:31:22 (3866440): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/10/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
SIGSEGV: segmentation violation
Stack trace (16 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c) [0x611d9643ff8c]
/lib/x86_64-linux-gnu/libc.so.6(+0x3fdf0) [0x7eead3e66df0]
/lib/x86_64-linux-gnu/libc.so.6(__libc_free+0x22) [0x7eead3eca262]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd) [0x611d9645c3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4) [0x611d9647b8e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x3fdf0) [0x7eead3e66df0]
/lib/x86_64-linux-gnu/libc.so.6(+0x9a9ee) [0x7eead3ec19ee]
/lib/x86_64-linux-gnu/libc.so.6(+0x8f668) [0x7eead3eb6668]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0x2a) [0x7eead3f02f7a]
/lib/x86_64-linux-gnu/libc.so.6(nanosleep+0x13) [0x7eead3f0e393]
/lib/x86_64-linux-gnu/libc.so.6(usleep+0x43) [0x7eead3f37373]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf) [0x611d96451adf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784) [0x611d9641e784]
/lib/x86_64-linux-gnu/libc.so.6(+0x29ca8) [0x7eead3e50ca8]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x85) [0x7eead3e50d65]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a) [0x611d9641aa3a]

Exiting...
08:47:21 (3377): wrapper (7.17.26016): starting
08:47:21 (3377): wrapper (7.17.26016): starting
08:47:21 (3377): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/10/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
08:51:37 (14375): wrapper (7.17.26016): starting
08:51:37 (14375): wrapper (7.17.26016): starting
08:51:37 (14375): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/10/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
08:59:06 (25947): wrapper (7.17.26016): starting
08:59:06 (25947): wrapper (7.17.26016): starting
08:59:06 (25947): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/10/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
09:06:51 (37840): wrapper (7.17.26016): starting
09:06:51 (37840): wrapper (7.17.26016): starting
09:06:51 (37840): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/10/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
10:10:04 (133146): wrapper (7.17.26016): starting
10:10:04 (133146): wrapper (7.17.26016): starting
10:10:04 (133146): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/10/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
10:12:53 (137436): wrapper (7.17.26016): starting
10:12:53 (137436): wrapper (7.17.26016): starting
10:12:53 (137436): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/10/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
10:15:49 (141851): wrapper (7.17.26016): starting
10:15:49 (141851): wrapper (7.17.26016): starting
10:15:49 (141851): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/10/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
10:18:30 (145790): wrapper (7.17.26016): starting
10:18:30 (145790): wrapper (7.17.26016): starting
10:18:30 (145790): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/10/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
11:28:26 (1715): wrapper (7.17.26016): starting
11:28:26 (1715): wrapper (7.17.26016): starting
11:28:26 (1715): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/10/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)

</stderr_txt>
]]>