Task 98944734

Name	ebola_RdRp_v1_sidock_00483623_r2_s-24.0_0
Workunit	69476506
Created	24 Jan 2026, 16:22:41 UTC
Sent	25 Jan 2026, 6:23:41 UTC
Report deadline	29 Jan 2026, 6:23:41 UTC
Received	25 Jan 2026, 10:48:32 UTC
Server state	Over
Outcome	Computation error
Client state	Aborted by user
Exit status	203 (0x000000CB) EXIT_ABORTED_VIA_GUI
Computer ID	82929
Run time	2 hours 3 min 51 sec
CPU time	2 hours 3 min 51 sec
Validate state	Invalid
Credit	0.00
Device peak FLOPS	1.00 GFLOPS
Application version	CurieMarieDock 0.2.0 long tasks v2.02 x86_64-pc-linux-gnu
Peak working set size	235.91 MB
Peak swap size	245.29 MB
Peak disk usage	20.20 MB
Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<message>
aborted by user</message>
<stderr_txt>
07:24:17 (3763657): wrapper (7.17.26016): starting
07:24:18 (3763657): wrapper (7.17.26016): starting
07:24:18 (3763657): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/16/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
07:38:45 (3786353): wrapper (7.17.26016): starting
07:38:45 (3786353): wrapper (7.17.26016): starting
07:38:45 (3786353): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/16/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
SIGSEGV: segmentation violation
Stack trace (16 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c) [0x5d06d0c3ff8c]
/lib/x86_64-linux-gnu/libc.so.6(+0x3fdf0) [0x7d92dac0ddf0]
/lib/x86_64-linux-gnu/libc.so.6(__libc_free+0x22) [0x7d92dac71262]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd) [0x5d06d0c5c3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4) [0x5d06d0c7b8e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x3fdf0) [0x7d92dac0ddf0]
/lib/x86_64-linux-gnu/libc.so.6(+0x9a9ee) [0x7d92dac689ee]
/lib/x86_64-linux-gnu/libc.so.6(+0x8f668) [0x7d92dac5d668]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0x2a) [0x7d92daca9f7a]
/lib/x86_64-linux-gnu/libc.so.6(nanosleep+0x13) [0x7d92dacb5393]
/lib/x86_64-linux-gnu/libc.so.6(usleep+0x43) [0x7d92dacde373]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf) [0x5d06d0c51adf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784) [0x5d06d0c1e784]
/lib/x86_64-linux-gnu/libc.so.6(+0x29ca8) [0x7d92dabf7ca8]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x85) [0x7d92dabf7d65]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a) [0x5d06d0c1aa3a]

Exiting...
08:31:21 (3866451): wrapper (7.17.26016): starting
08:31:22 (3866451): wrapper (7.17.26016): starting
08:31:22 (3866451): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/16/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
free(): invalid pointer
SIGABRT: abort called
Stack trace (20 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c) [0x61ec6443ff8c]
/lib/x86_64-linux-gnu/libc.so.6(+0x3fdf0) [0x73b9c91d4df0]
/lib/x86_64-linux-gnu/libc.so.6(+0x9495c) [0x73b9c922995c]
/lib/x86_64-linux-gnu/libc.so.6(gsignal+0x12) [0x73b9c91d4cc2]
/lib/x86_64-linux-gnu/libc.so.6(abort+0x22) [0x73b9c91bd4ac]
/lib/x86_64-linux-gnu/libc.so.6(+0x29291) [0x73b9c91be291]
/lib/x86_64-linux-gnu/libc.so.6(+0x9e465) [0x73b9c9233465]
/lib/x86_64-linux-gnu/libc.so.6(__libc_free+0x19c) [0x73b9c92383dc]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd) [0x61ec6445c3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4) [0x61ec6447b8e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x3fdf0) [0x73b9c91d4df0]
/lib/x86_64-linux-gnu/libc.so.6(+0x9a9ee) [0x73b9c922f9ee]
/lib/x86_64-linux-gnu/libc.so.6(+0x8f668) [0x73b9c9224668]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0x2a) [0x73b9c9270f7a]
/lib/x86_64-linux-gnu/libc.so.6(nanosleep+0x13) [0x73b9c927c393]
/lib/x86_64-linux-gnu/libc.so.6(usleep+0x43) [0x73b9c92a5373]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf) [0x61ec64451adf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3cdcd) [0x61ec6443cdcd]
/lib/x86_64-linux-gnu/libc.so.6(+0x92b7b) [0x73b9c9227b7b]
/lib/x86_64-linux-gnu/libc.so.6(+0x1107b8) [0x73b9c92a57b8]

Exiting...
08:47:21 (3394): wrapper (7.17.26016): starting
08:47:21 (3394): wrapper (7.17.26016): starting
08:47:21 (3394): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/16/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
08:59:06 (25979): wrapper (7.17.26016): starting
08:59:06 (25979): wrapper (7.17.26016): starting
08:59:06 (25979): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/16/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
09:06:51 (37850): wrapper (7.17.26016): starting
09:06:51 (37850): wrapper (7.17.26016): starting
09:06:51 (37850): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/16/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
10:10:04 (133155): wrapper (7.17.26016): starting
10:10:04 (133155): wrapper (7.17.26016): starting
10:10:04 (133155): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/16/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
10:12:53 (137446): wrapper (7.17.26016): starting
10:12:53 (137446): wrapper (7.17.26016): starting
10:12:53 (137446): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/16/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
10:15:49 (141861): wrapper (7.17.26016): starting
10:15:49 (141861): wrapper (7.17.26016): starting
10:15:49 (141861): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/16/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
10:18:30 (145800): wrapper (7.17.26016): starting
10:18:30 (145800): wrapper (7.17.26016): starting
10:18:30 (145800): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/16/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
11:28:26 (1718): wrapper (7.17.26016): starting
11:28:26 (1718): wrapper (7.17.26016): starting
11:28:26 (1718): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/16/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)

</stderr_txt>
]]>