Task 98979163

Name ebola_RdRp_v1_sidock_00492218_r4_s-24.0_0
Workunit 69510888
Created 24 Jan 2026, 16:52:36 UTC
Sent 26 Jan 2026, 14:08:25 UTC
Report deadline 30 Jan 2026, 14:08:25 UTC
Received 26 Jan 2026, 15:32:30 UTC
Server state Over
Outcome Validate error
Client state Done
Exit status 0 (0x00000000)
Computer ID 80299
Run time 4 min 57 sec
CPU time 4 min 5 sec
Validate state Invalid
Credit 0.00
Device peak FLOPS 8.40 GFLOPS
Application version CurieMarieDock 0.2.0 long tasks v2.02
x86_64-pc-linux-gnu
Peak working set size 236.78 MB
Peak swap size 244.19 MB
Peak disk usage 20.10 MB

Stderr output

<core_client_version>7.24.1</core_client_version>
<![CDATA[
<stderr_txt>
14:09:01 (189087): wrapper (7.17.26016): starting
14:09:02 (189087): wrapper (7.17.26016): starting
14:09:02 (189087): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/33/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
free(): invalid pointer
SIGABRT: abort called
Stack trace (20 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c)[0x57b54623ff8c]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x79b2aee45330]
/lib/x86_64-linux-gnu/libc.so.6(pthread_kill+0x11c)[0x79b2aee9eb2c]
/lib/x86_64-linux-gnu/libc.so.6(gsignal+0x1e)[0x79b2aee4527e]
/lib/x86_64-linux-gnu/libc.so.6(abort+0xdf)[0x79b2aee288ff]
/lib/x86_64-linux-gnu/libc.so.6(+0x297b6)[0x79b2aee297b6]
/lib/x86_64-linux-gnu/libc.so.6(+0xa8ff5)[0x79b2aeea8ff5]
/lib/x86_64-linux-gnu/libc.so.6(+0xab38c)[0x79b2aeeab38c]
/lib/x86_64-linux-gnu/libc.so.6(__libc_free+0x7e)[0x79b2aeeaddae]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd)[0x57b54625c3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4)[0x57b54627b8e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x79b2aee45330]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0xbf)[0x79b2aeeecadf]
/lib/x86_64-linux-gnu/libc.so.6(nanosleep+0x17)[0x79b2aeef9a27]
/lib/x86_64-linux-gnu/libc.so.6(usleep+0x4c)[0x79b2aef2975c]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf)[0x57b546251adf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784)[0x57b54621e784]
/lib/x86_64-linux-gnu/libc.so.6(+0x2a1ca)[0x79b2aee2a1ca]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x8b)[0x79b2aee2a28b]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a)[0x57b54621aa3a]

Exiting...
14:25:48 (169223): wrapper (7.17.26016): starting
14:25:48 (169223): wrapper (7.17.26016): starting
14:25:48 (169223): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/33/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
14:29:15 (221203): wrapper (7.17.26016): starting
14:29:15 (221203): wrapper (7.17.26016): starting
14:29:15 (221203): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/33/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
14:32:55 (222309): wrapper (7.17.26016): starting
14:32:56 (222309): wrapper (7.17.26016): starting
14:32:56 (222309): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/33/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
15:23:36 (229691): wrapper (7.17.26016): starting
15:23:37 (229691): wrapper (7.17.26016): starting
15:23:37 (229691): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/33/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
15:32:12 (229691): cmdock exited; CPU time 4.624800
15:32:12 (229691): called boinc_finish(0)

</stderr_txt>
]]>


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