Task 99012755

Name ebola_RdRp_v1_sidock_00465942_r1_s-24.0_1
Workunit 69405781
Created 26 Jan 2026, 2:38:58 UTC
Sent 27 Jan 2026, 22:11:09 UTC
Report deadline 31 Jan 2026, 22:11:09 UTC
Received 28 Jan 2026, 10:19:33 UTC
Server state Over
Outcome Validate error
Client state Done
Exit status 0 (0x00000000)
Computer ID 80299
Run time 34 min 59 sec
CPU time 34 min 33 sec
Validate state Invalid
Credit 0.00
Device peak FLOPS 8.40 GFLOPS
Application version CurieMarieDock 0.2.0 long tasks v2.02
x86_64-pc-linux-gnu
Peak working set size 238.13 MB
Peak swap size 245.09 MB
Peak disk usage 19.99 MB

Stderr output

<core_client_version>7.24.1</core_client_version>
<![CDATA[
<stderr_txt>
22:44:34 (279011): wrapper (7.17.26016): starting
22:44:34 (279011): wrapper (7.17.26016): starting
22:44:34 (279011): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/4/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
free(): invalid pointer
SIGABRT: abort called
Stack trace (20 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c)[0x5ad4b3e3ff8c]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x77f6a4445330]
/lib/x86_64-linux-gnu/libc.so.6(pthread_kill+0x11c)[0x77f6a449eb2c]
/lib/x86_64-linux-gnu/libc.so.6(gsignal+0x1e)[0x77f6a444527e]
/lib/x86_64-linux-gnu/libc.so.6(abort+0xdf)[0x77f6a44288ff]
/lib/x86_64-linux-gnu/libc.so.6(+0x297b6)[0x77f6a44297b6]
/lib/x86_64-linux-gnu/libc.so.6(+0xa8ff5)[0x77f6a44a8ff5]
/lib/x86_64-linux-gnu/libc.so.6(+0xab38c)[0x77f6a44ab38c]
/lib/x86_64-linux-gnu/libc.so.6(__libc_free+0x7e)[0x77f6a44addae]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd)[0x5ad4b3e5c3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4)[0x5ad4b3e7b8e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x77f6a4445330]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0xbf)[0x77f6a44ecadf]
/lib/x86_64-linux-gnu/libc.so.6(nanosleep+0x17)[0x77f6a44f9a27]
/lib/x86_64-linux-gnu/libc.so.6(usleep+0x4c)[0x77f6a452975c]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf)[0x5ad4b3e51adf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784)[0x5ad4b3e1e784]
/lib/x86_64-linux-gnu/libc.so.6(+0x2a1ca)[0x77f6a442a1ca]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x8b)[0x77f6a442a28b]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a)[0x5ad4b3e1aa3a]

Exiting...
10:06:45 (5129): wrapper (7.17.26016): starting
10:06:46 (5129): wrapper (7.17.26016): starting
10:06:46 (5129): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/4/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
10:16:25 (5144): wrapper (7.17.26016): starting
10:16:25 (5144): wrapper (7.17.26016): starting
10:16:25 (5144): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/4/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
10:16:30 (5144): cmdock exited; CPU time 4.130738
10:16:30 (5144): called boinc_finish(0)

</stderr_txt>
]]>


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