Task 99022459

Name	ebola_RdRp_v1_sidock_00501185_r2_s-24.0_0
Workunit	69546754
Created	28 Jan 2026, 1:44:19 UTC
Sent	28 Jan 2026, 7:34:30 UTC
Report deadline	1 Feb 2026, 7:34:30 UTC
Received	2 Feb 2026, 9:21:47 UTC
Server state	Over
Outcome	Computation error
Client state	Compute error
Exit status	195 (0x000000C3) EXIT_CHILD_FAILED
Computer ID	61274
Run time	12 hours 3 min 25 sec
CPU time	12 hours 3 min 25 sec
Validate state	Invalid
Credit	0.00
Device peak FLOPS	6.13 GFLOPS
Application version	CurieMarieDock 0.2.0 long tasks v2.02 x86_64-pc-linux-gnu
Peak working set size	239.49 MB
Peak swap size	246.85 MB
Peak disk usage	20.21 MB
Stderr output

<core_client_version>7.24.1</core_client_version>
<![CDATA[
<message>
process exited with code 195 (0xc3, -61)</message>
<stderr_txt>
15:33:01 (516397): wrapper (7.17.26016): starting
15:33:01 (516397): wrapper (7.17.26016): starting
15:33:01 (516397): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/1/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
19:50:49 (2188): wrapper (7.17.26016): starting
19:50:49 (2188): wrapper (7.17.26016): starting
19:50:49 (2188): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/1/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
SIGSEGV: segmentation violation
Stack trace (14 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c)[0x5838d2e3ff8c]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x75910f245330]
/lib/x86_64-linux-gnu/libc.so.6(__libc_free+0x25)[0x75910f2add55]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd)[0x5838d2e5c3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4)[0x5838d2e7b8e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x75910f245330]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0xbf)[0x75910f2ecadf]
/lib/x86_64-linux-gnu/libc.so.6(nanosleep+0x17)[0x75910f2f9a27]
/lib/x86_64-linux-gnu/libc.so.6(usleep+0x4c)[0x75910f32975c]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf)[0x5838d2e51adf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784)[0x5838d2e1e784]
/lib/x86_64-linux-gnu/libc.so.6(+0x2a1ca)[0x75910f22a1ca]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x8b)[0x75910f22a28b]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a)[0x5838d2e1aa3a]

Exiting...
18:32:50 (11926): wrapper (7.17.26016): starting
18:32:50 (11926): wrapper (7.17.26016): starting
18:32:50 (11926): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/1/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
free(): invalid pointer
SIGABRT: abort called
Stack trace (20 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c)[0x5e597503ff8c]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x7e5459845330]
/lib/x86_64-linux-gnu/libc.so.6(pthread_kill+0x11c)[0x7e545989eb2c]
/lib/x86_64-linux-gnu/libc.so.6(gsignal+0x1e)[0x7e545984527e]
/lib/x86_64-linux-gnu/libc.so.6(abort+0xdf)[0x7e54598288ff]
/lib/x86_64-linux-gnu/libc.so.6(+0x297b6)[0x7e54598297b6]
/lib/x86_64-linux-gnu/libc.so.6(+0xa8ff5)[0x7e54598a8ff5]
/lib/x86_64-linux-gnu/libc.so.6(+0xab38c)[0x7e54598ab38c]
/lib/x86_64-linux-gnu/libc.so.6(__libc_free+0x7e)[0x7e54598addae]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd)[0x5e597505c3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4)[0x5e597507b8e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x7e5459845330]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0xbf)[0x7e54598ecadf]
/lib/x86_64-linux-gnu/libc.so.6(nanosleep+0x17)[0x7e54598f9a27]
/lib/x86_64-linux-gnu/libc.so.6(usleep+0x4c)[0x7e545992975c]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf)[0x5e5975051adf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784)[0x5e597501e784]
/lib/x86_64-linux-gnu/libc.so.6(+0x2a1ca)[0x7e545982a1ca]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x8b)[0x7e545982a28b]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a)[0x5e597501aa3a]

Exiting...
12:25:57 (2161): wrapper (7.17.26016): starting
12:25:57 (2161): wrapper (7.17.26016): starting
12:25:57 (2161): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/1/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
SIGSEGV: segmentation violation
Stack trace (14 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c)[0x652fd983ff8c]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x73cceca45330]
/lib/x86_64-linux-gnu/libc.so.6(__libc_free+0x25)[0x73ccecaadd55]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd)[0x652fd985c3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4)[0x652fd987b8e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x73cceca45330]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0xbf)[0x73ccecaecadf]
/lib/x86_64-linux-gnu/libc.so.6(nanosleep+0x17)[0x73ccecaf9a27]
/lib/x86_64-linux-gnu/libc.so.6(usleep+0x4c)[0x73ccecb2975c]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf)[0x652fd9851adf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784)[0x652fd981e784]
/lib/x86_64-linux-gnu/libc.so.6(+0x2a1ca)[0x73cceca2a1ca]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x8b)[0x73cceca2a28b]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a)[0x652fd981aa3a]

Exiting...
18:46:52 (2097): wrapper (7.17.26016): starting
18:46:52 (2097): wrapper (7.17.26016): starting
18:46:52 (2097): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/1/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
SIGSEGV: segmentation violation
Stack trace (14 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c)[0x645a1ec3ff8c]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x77695e645330]
/lib/x86_64-linux-gnu/libc.so.6(__libc_free+0x25)[0x77695e6add55]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd)[0x645a1ec5c3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4)[0x645a1ec7b8e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x77695e645330]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0xbf)[0x77695e6ecadf]
/lib/x86_64-linux-gnu/libc.so.6(nanosleep+0x17)[0x77695e6f9a27]
/lib/x86_64-linux-gnu/libc.so.6(usleep+0x4c)[0x77695e72975c]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf)[0x645a1ec51adf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784)[0x645a1ec1e784]
/lib/x86_64-linux-gnu/libc.so.6(+0x2a1ca)[0x77695e62a1ca]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x8b)[0x77695e62a28b]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a)[0x645a1ec1aa3a]

Exiting...
10:19:35 (2215): wrapper (7.17.26016): starting
10:19:35 (2215): wrapper (7.17.26016): starting
10:19:35 (2215): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/1/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
corrupted size vs. prev_size
10:20:00 (2215): cmdock exited; CPU time 18.410870
10:20:00 (2215): app exit status: 0x86
10:20:00 (2215): called boinc_finish(195)

</stderr_txt>
]]>