Task 99044192

Name ebola_RdRp_v1_sidock_00506620_r1_s-24.0_0
Workunit 69568493
Created 28 Jan 2026, 2:03:31 UTC
Sent 29 Jan 2026, 7:32:54 UTC
Report deadline 2 Feb 2026, 7:32:54 UTC
Received 30 Jan 2026, 3:00:19 UTC
Server state Over
Outcome Validate error
Client state Done
Exit status 0 (0x00000000)
Computer ID 54584
Run time 3 hours 57 min 26 sec
CPU time 3 hours 57 min 20 sec
Validate state Invalid
Credit 0.00
Device peak FLOPS 9.95 GFLOPS
Application version CurieMarieDock 0.2.0 long tasks v2.02
x86_64-pc-linux-gnu
Peak working set size 239.00 MB
Peak swap size 245.98 MB
Peak disk usage 20.23 MB

Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
02:59:59 (89415): wrapper (7.17.26016): starting
02:59:59 (89415): wrapper (7.17.26016): starting
02:59:59 (89415): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/0/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
free(): invalid pointer
SIGABRT: abort called
Stack trace (20 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c)[0x5bfda9e3ff8c]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x749a4de45330]
/lib/x86_64-linux-gnu/libc.so.6(pthread_kill+0x11c)[0x749a4de9eb2c]
/lib/x86_64-linux-gnu/libc.so.6(gsignal+0x1e)[0x749a4de4527e]
/lib/x86_64-linux-gnu/libc.so.6(abort+0xdf)[0x749a4de288ff]
/lib/x86_64-linux-gnu/libc.so.6(+0x297b6)[0x749a4de297b6]
/lib/x86_64-linux-gnu/libc.so.6(+0xa8ff5)[0x749a4dea8ff5]
/lib/x86_64-linux-gnu/libc.so.6(+0xab38c)[0x749a4deab38c]
/lib/x86_64-linux-gnu/libc.so.6(__libc_free+0x7e)[0x749a4deaddae]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd)[0x5bfda9e5c3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4)[0x5bfda9e7b8e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x749a4de45330]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0xbf)[0x749a4deecadf]
/lib/x86_64-linux-gnu/libc.so.6(nanosleep+0x17)[0x749a4def9a27]
/lib/x86_64-linux-gnu/libc.so.6(usleep+0x4c)[0x749a4df2975c]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf)[0x5bfda9e51adf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784)[0x5bfda9e1e784]
/lib/x86_64-linux-gnu/libc.so.6(+0x2a1ca)[0x749a4de2a1ca]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x8b)[0x749a4de2a28b]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a)[0x5bfda9e1aa3a]

Exiting...
20:13:56 (2757): wrapper (7.17.26016): starting
20:13:56 (2757): wrapper (7.17.26016): starting
20:13:56 (2757): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/0/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
20:17:27 (2791): wrapper (7.17.26016): starting
20:17:27 (2791): wrapper (7.17.26016): starting
20:17:27 (2791): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/0/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
20:17:32 (2791): cmdock exited; CPU time 3.796311
20:17:32 (2791): called boinc_finish(0)

</stderr_txt>
]]>


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