Task 99055472

Name ebola_RdRp_v1_sidock_00509428_r3_s-24.0_0
Workunit 69579727
Created 28 Jan 2026, 2:13:37 UTC
Sent 29 Jan 2026, 20:20:43 UTC
Report deadline 2 Feb 2026, 20:20:43 UTC
Received 30 Jan 2026, 2:35:45 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 80709
Run time 5 hours 55 min 43 sec
CPU time 5 hours 55 min 29 sec
Validate state Valid
Credit 486.53
Device peak FLOPS 3.61 GFLOPS
Application version CurieMarieDock 0.2.0 long tasks v2.02
x86_64-pc-linux-gnu
Peak working set size 239.79 MB
Peak swap size 246.93 MB
Peak disk usage 20.27 MB

Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
15:20:50 (506598): wrapper (7.17.26016): starting
15:20:50 (506598): wrapper (7.17.26016): starting
15:20:50 (506598): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc/slots/1/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
free(): invalid pointer
SIGABRT: abort called
Stack trace (20 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c)[0x629a8103ff8c]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x721da7045330]
/lib/x86_64-linux-gnu/libc.so.6(pthread_kill+0x11c)[0x721da709eb2c]
/lib/x86_64-linux-gnu/libc.so.6(gsignal+0x1e)[0x721da704527e]
/lib/x86_64-linux-gnu/libc.so.6(abort+0xdf)[0x721da70288ff]
/lib/x86_64-linux-gnu/libc.so.6(+0x297b6)[0x721da70297b6]
/lib/x86_64-linux-gnu/libc.so.6(+0xa8ff5)[0x721da70a8ff5]
/lib/x86_64-linux-gnu/libc.so.6(+0xab38c)[0x721da70ab38c]
/lib/x86_64-linux-gnu/libc.so.6(__libc_free+0x7e)[0x721da70addae]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd)[0x629a8105c3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4)[0x629a8107b8e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x721da7045330]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0xbf)[0x721da70ecadf]
/lib/x86_64-linux-gnu/libc.so.6(nanosleep+0x17)[0x721da70f9a27]
/lib/x86_64-linux-gnu/libc.so.6(usleep+0x4c)[0x721da712975c]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf)[0x629a81051adf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784)[0x629a8101e784]
/lib/x86_64-linux-gnu/libc.so.6(+0x2a1ca)[0x721da702a1ca]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x8b)[0x721da702a28b]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a)[0x629a8101aa3a]

Exiting...
17:34:07 (3626): wrapper (7.17.26016): starting
17:34:07 (3626): wrapper (7.17.26016): starting
17:34:07 (3626): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc/slots/1/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
21:35:31 (3626): cmdock exited; CPU time 14483.429968
21:35:31 (3626): called boinc_finish(0)

</stderr_txt>
]]>


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