Task 99069746

Name ebola_RdRp_v1_sidock_00512995_r2_s-24.0_0
Workunit 69593994
Created 28 Jan 2026, 2:26:14 UTC
Sent 30 Jan 2026, 12:01:56 UTC
Report deadline 3 Feb 2026, 12:01:56 UTC
Received 31 Jan 2026, 15:46:41 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 66242
Run time 9 hours 43 min 31 sec
CPU time 9 hours 41 min 22 sec
Validate state Valid
Credit 589.47
Device peak FLOPS 7.61 GFLOPS
Application version CurieMarieDock 0.2.0 long tasks v2.02
x86_64-pc-linux-gnu
Peak working set size 239.90 MB
Peak swap size 247.16 MB
Peak disk usage 20.38 MB

Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
16:58:08 (714112): wrapper (7.17.26016): starting
16:58:08 (714112): wrapper (7.17.26016): starting
16:58:08 (714112): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc/slots/5/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
free(): invalid size
SIGABRT: abort called
Stack trace (21 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c) [0x563c3623ff8c]
/lib64/libc.so.6(+0x42910) [0x7f9078642910]
/lib64/libc.so.6(+0x9dd3c) [0x7f907869dd3c]
/lib64/libc.so.6(gsignal+0x18) [0x7f90786427b6]
/lib64/libc.so.6(abort+0x2a) [0x7f907862934b]
/lib64/libc.so.6(+0x2a3ad) [0x7f907862a3ad]
/lib64/libc.so.6(+0xa8b77) [0x7f90786a8b77]
/lib64/libc.so.6(+0xa8ba1) [0x7f90786a8ba1]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd) [0x563c3625c3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4) [0x563c3627b8e4]
/lib64/libc.so.6(+0x42910) [0x7f9078642910]
/lib64/libc.so.6(+0xa4812) [0x7f90786a4812]
/lib64/libc.so.6(+0x98008) [0x7f9078698008]
/lib64/libc.so.6(clock_nanosleep+0x30) [0x7f90786e8fbe]
/lib64/libc.so.6(nanosleep+0x19) [0x7f90786f4fe7]
/lib64/libc.so.6(usleep+0x49) [0x7f9078720717]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf) [0x563c36251adf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784) [0x563c3621e784]
/lib64/libc.so.6(+0x2b2fb) [0x7f907862b2fb]
/lib64/libc.so.6(__libc_start_main+0x8d) [0x7f907862b3cb]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a) [0x563c3621aa3a]

Exiting...
14:06:22 (6148): wrapper (7.17.26016): starting
14:06:22 (6148): wrapper (7.17.26016): starting
14:06:22 (6148): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc/slots/5/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
16:46:27 (6148): cmdock exited; CPU time 9550.128283
16:46:27 (6148): called boinc_finish(0)

</stderr_txt>
]]>


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