Task 99100271

Name ebola_RdRp_v1_sidock_00483307_r1_s-24.0_1
Workunit 69475241
Created 29 Jan 2026, 5:11:28 UTC
Sent 31 Jan 2026, 19:11:56 UTC
Report deadline 4 Feb 2026, 19:11:56 UTC
Received 1 Feb 2026, 21:09:41 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 79764
Run time 9 hours 45 min 1 sec
CPU time 9 hours 44 min 53 sec
Validate state Valid
Credit 720.50
Device peak FLOPS 9.98 GFLOPS
Application version CurieMarieDock 0.2.0 long tasks v2.02
x86_64-pc-linux-gnu
Peak working set size 241.79 MB
Peak swap size 248.63 MB
Peak disk usage 20.48 MB

Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
00:01:48 (236203): wrapper (7.17.26016): starting
00:01:48 (236203): wrapper (7.17.26016): starting
00:01:48 (236203): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/7/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
free(): invalid pointer
SIGABRT: abort called
Stack trace (20 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c)[0x5796c343ff8c]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x7add00445330]
/lib/x86_64-linux-gnu/libc.so.6(pthread_kill+0x11c)[0x7add0049eb2c]
/lib/x86_64-linux-gnu/libc.so.6(gsignal+0x1e)[0x7add0044527e]
/lib/x86_64-linux-gnu/libc.so.6(abort+0xdf)[0x7add004288ff]
/lib/x86_64-linux-gnu/libc.so.6(+0x297b6)[0x7add004297b6]
/lib/x86_64-linux-gnu/libc.so.6(+0xa8ff5)[0x7add004a8ff5]
/lib/x86_64-linux-gnu/libc.so.6(+0xab38c)[0x7add004ab38c]
/lib/x86_64-linux-gnu/libc.so.6(__libc_free+0x7e)[0x7add004addae]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd)[0x5796c345c3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4)[0x5796c347b8e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x7add00445330]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0xbf)[0x7add004ecadf]
/lib/x86_64-linux-gnu/libc.so.6(nanosleep+0x17)[0x7add004f9a27]
/lib/x86_64-linux-gnu/libc.so.6(usleep+0x4c)[0x7add0052975c]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf)[0x5796c3451adf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784)[0x5796c341e784]
/lib/x86_64-linux-gnu/libc.so.6(+0x2a1ca)[0x7add0042a1ca]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x8b)[0x7add0042a28b]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a)[0x5796c341aa3a]

Exiting...
10:15:03 (313765): wrapper (7.17.26016): starting
10:15:03 (313765): wrapper (7.17.26016): starting
10:15:03 (313765): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/7/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
15:09:27 (313765): cmdock exited; CPU time 17661.424675
15:09:27 (313765): called boinc_finish(0)

</stderr_txt>
]]>


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