Task 99111656

Name ebola_RdRp_v1_sidock_00521198_r4_s-24.0_0
Workunit 69626808
Created 31 Jan 2026, 23:44:31 UTC
Sent 1 Feb 2026, 5:41:45 UTC
Report deadline 5 Feb 2026, 5:41:45 UTC
Received 2 Feb 2026, 3:00:27 UTC
Server state Over
Outcome Validate error
Client state Done
Exit status 0 (0x00000000)
Computer ID 54584
Run time 3 hours 13 min 34 sec
CPU time 3 hours 13 min 26 sec
Validate state Invalid
Credit 0.00
Device peak FLOPS 9.95 GFLOPS
Application version CurieMarieDock 0.2.0 long tasks v2.02
x86_64-pc-linux-gnu
Peak working set size 239.51 MB
Peak swap size 247.19 MB
Peak disk usage 20.23 MB

Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
03:43:39 (60801): wrapper (7.17.26016): starting
03:43:39 (60801): wrapper (7.17.26016): starting
03:43:39 (60801): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/9/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
free(): invalid pointer
SIGABRT: abort called
Stack trace (20 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c)[0x559d9fc3ff8c]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x7fb5f6645330]
/lib/x86_64-linux-gnu/libc.so.6(pthread_kill+0x11c)[0x7fb5f669eb2c]
/lib/x86_64-linux-gnu/libc.so.6(gsignal+0x1e)[0x7fb5f664527e]
/lib/x86_64-linux-gnu/libc.so.6(abort+0xdf)[0x7fb5f66288ff]
/lib/x86_64-linux-gnu/libc.so.6(+0x297b6)[0x7fb5f66297b6]
/lib/x86_64-linux-gnu/libc.so.6(+0xa8ff5)[0x7fb5f66a8ff5]
/lib/x86_64-linux-gnu/libc.so.6(+0xab38c)[0x7fb5f66ab38c]
/lib/x86_64-linux-gnu/libc.so.6(__libc_free+0x7e)[0x7fb5f66addae]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd)[0x559d9fc5c3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4)[0x559d9fc7b8e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x7fb5f6645330]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0xbf)[0x7fb5f66ecadf]
/lib/x86_64-linux-gnu/libc.so.6(nanosleep+0x17)[0x7fb5f66f9a27]
/lib/x86_64-linux-gnu/libc.so.6(usleep+0x4c)[0x7fb5f672975c]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf)[0x559d9fc51adf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784)[0x559d9fc1e784]
/lib/x86_64-linux-gnu/libc.so.6(+0x2a1ca)[0x7fb5f662a1ca]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x8b)[0x7fb5f662a28b]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a)[0x559d9fc1aa3a]

Exiting...
20:28:07 (2754): wrapper (7.17.26016): starting
20:28:07 (2754): wrapper (7.17.26016): starting
20:28:07 (2754): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/9/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
21:00:03 (8717): wrapper (7.17.26016): starting
21:00:03 (8717): wrapper (7.17.26016): starting
21:00:03 (8717): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/9/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
21:00:08 (8717): cmdock exited; CPU time 4.084586
21:00:08 (8717): called boinc_finish(0)

</stderr_txt>
]]>


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