Task 99121651

Name	ebola_RdRp_v1_sidock_00523701_r3_s-24.0_0
Workunit	69636819
Created	31 Jan 2026, 23:53:42 UTC
Sent	1 Feb 2026, 15:34:22 UTC
Report deadline	5 Feb 2026, 15:34:22 UTC
Received	2 Feb 2026, 7:25:19 UTC
Server state	Over
Outcome	Validate error
Client state	Done
Exit status	0 (0x00000000)
Computer ID	80998
Run time	1 hours 16 min 15 sec
CPU time	1 hours 15 min 46 sec
Validate state	Invalid
Credit	0.00
Device peak FLOPS	10.64 GFLOPS
Application version	CurieMarieDock 0.2.0 long tasks v2.02 x86_64-pc-linux-gnu
Peak working set size	239.03 MB
Peak swap size	246.18 MB
Peak disk usage	20.19 MB

Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
08:02:23 (206667): wrapper (7.17.26016): starting
08:02:23 (206667): wrapper (7.17.26016): starting
08:02:23 (206667): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/8/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
SIGSEGV: segmentation violation
Stack trace (16 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c) [0x560cb0a3ff8c]
/lib/x86_64-linux-gnu/libc.so.6(+0x3fdf0) [0x7f6a5528cdf0]
/lib/x86_64-linux-gnu/libc.so.6(__libc_free+0x22) [0x7f6a552f0262]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd) [0x560cb0a5c3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4) [0x560cb0a7b8e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x3fdf0) [0x7f6a5528cdf0]
/lib/x86_64-linux-gnu/libc.so.6(+0x9a9ee) [0x7f6a552e79ee]
/lib/x86_64-linux-gnu/libc.so.6(+0x8f668) [0x7f6a552dc668]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0x2a) [0x7f6a55328f7a]
/lib/x86_64-linux-gnu/libc.so.6(nanosleep+0x13) [0x7f6a55334393]
/lib/x86_64-linux-gnu/libc.so.6(usleep+0x43) [0x7f6a5535d373]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf) [0x560cb0a51adf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784) [0x560cb0a1e784]
/lib/x86_64-linux-gnu/libc.so.6(+0x29ca8) [0x7f6a55276ca8]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x85) [0x7f6a55276d65]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a) [0x560cb0a1aa3a]

Exiting...
09:19:52 (1528): wrapper (7.17.26016): starting
09:19:52 (1528): wrapper (7.17.26016): starting
09:19:52 (1528): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/8/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
free(): invalid pointer
SIGABRT: abort called
Stack trace (21 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c) [0x5589b623ff8c]
/lib/x86_64-linux-gnu/libc.so.6(+0x3fdf0) [0x7fb1b6275df0]
/lib/x86_64-linux-gnu/libc.so.6(+0x9495c) [0x7fb1b62ca95c]
/lib/x86_64-linux-gnu/libc.so.6(gsignal+0x12) [0x7fb1b6275cc2]
/lib/x86_64-linux-gnu/libc.so.6(abort+0x22) [0x7fb1b625e4ac]
/lib/x86_64-linux-gnu/libc.so.6(+0x29291) [0x7fb1b625f291]
/lib/x86_64-linux-gnu/libc.so.6(+0x9e465) [0x7fb1b62d4465]
/lib/x86_64-linux-gnu/libc.so.6(__libc_free+0x19c) [0x7fb1b62d93dc]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd) [0x5589b625c3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4) [0x5589b627b8e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x3fdf0) [0x7fb1b6275df0]
/lib/x86_64-linux-gnu/libc.so.6(+0x9a9ee) [0x7fb1b62d09ee]
/lib/x86_64-linux-gnu/libc.so.6(+0x8f668) [0x7fb1b62c5668]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0x2a) [0x7fb1b6311f7a]
/lib/x86_64-linux-gnu/libc.so.6(nanosleep+0x13) [0x7fb1b631d393]
/lib/x86_64-linux-gnu/libc.so.6(usleep+0x43) [0x7fb1b6346373]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf) [0x5589b6251adf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784) [0x5589b621e784]
/lib/x86_64-linux-gnu/libc.so.6(+0x29ca8) [0x7fb1b625fca8]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x85) [0x7fb1b625fd65]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a) [0x5589b621aa3a]

Exiting...
09:20:44 (1545): wrapper (7.17.26016): starting
09:20:44 (1545): wrapper (7.17.26016): starting
09:20:44 (1545): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/8/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
09:20:47 (1545): cmdock exited; CPU time 2.569345
09:20:47 (1545): called boinc_finish(0)

</stderr_txt>
]]>