Task 99139106

Name	ebola_RdRp_v1_sidock_00528019_r2_s-24.0_0
Workunit	69654090
Created	1 Feb 2026, 0:09:19 UTC
Sent	2 Feb 2026, 9:53:01 UTC
Report deadline	6 Feb 2026, 9:53:01 UTC
Received	7 Feb 2026, 4:27:11 UTC
Server state	Over
Outcome	Computation error
Client state	Aborted by user
Exit status	203 (0x000000CB) EXIT_ABORTED_VIA_GUI
Computer ID	71987
Run time	1 days 12 hours 43 min 52 sec
CPU time	1 days 12 hours 29 min 21 sec
Validate state	Invalid
Credit	0.00
Device peak FLOPS	2.96 GFLOPS
Application version	CurieMarieDock 0.2.0 long tasks v2.02 x86_64-pc-linux-gnu
Peak working set size	238.62 MB
Peak swap size	247.45 MB
Peak disk usage	20.35 MB

Stderr output

<core_client_version>7.18.1</core_client_version>
<![CDATA[
<message>
aborted by user</message>
<stderr_txt>
02:33:57 (128568): wrapper (7.17.26016): starting
02:33:57 (128568): wrapper (7.17.26016): starting
02:33:57 (128568): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/31/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
SIGSEGV: segmentation violation
Stack trace (14 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c)[0x57c639c3ff8c]
/lib/x86_64-linux-gnu/libc.so.6(+0x42520)[0x7473f0a42520]
/lib/x86_64-linux-gnu/libc.so.6(free+0x1e)[0x7473f0aa53fe]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd)[0x57c639c5c3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4)[0x57c639c7b8e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x42520)[0x7473f0a42520]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0xc8)[0x7473f0ae57f8]
/lib/x86_64-linux-gnu/libc.so.6(__nanosleep+0x17)[0x7473f0aea677]
/lib/x86_64-linux-gnu/libc.so.6(usleep+0x4f)[0x7473f0b1bfaf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf)[0x57c639c51adf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784)[0x57c639c1e784]
/lib/x86_64-linux-gnu/libc.so.6(+0x29d90)[0x7473f0a29d90]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x80)[0x7473f0a29e40]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a)[0x57c639c1aa3a]

Exiting...
12:07:47 (4109): wrapper (7.17.26016): starting
12:07:48 (4109): wrapper (7.17.26016): starting
12:07:48 (4109): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/31/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
free(): invalid pointer
SIGABRT: abort called
Stack trace (20 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c)[0x64c87183ff8c]
/lib/x86_64-linux-gnu/libc.so.6(+0x42520)[0x7bee98a42520]
/lib/x86_64-linux-gnu/libc.so.6(pthread_kill+0x12c)[0x7bee98a969fc]
/lib/x86_64-linux-gnu/libc.so.6(raise+0x16)[0x7bee98a42476]
/lib/x86_64-linux-gnu/libc.so.6(abort+0xd3)[0x7bee98a287f3]
/lib/x86_64-linux-gnu/libc.so.6(+0x89677)[0x7bee98a89677]
/lib/x86_64-linux-gnu/libc.so.6(+0xa0cfc)[0x7bee98aa0cfc]
/lib/x86_64-linux-gnu/libc.so.6(+0xa2a44)[0x7bee98aa2a44]
/lib/x86_64-linux-gnu/libc.so.6(free+0x73)[0x7bee98aa5453]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd)[0x64c87185c3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4)[0x64c87187b8e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x42520)[0x7bee98a42520]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0xc8)[0x7bee98ae57f8]
/lib/x86_64-linux-gnu/libc.so.6(__nanosleep+0x17)[0x7bee98aea677]
/lib/x86_64-linux-gnu/libc.so.6(usleep+0x4f)[0x7bee98b1bfaf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf)[0x64c871851adf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784)[0x64c87181e784]
/lib/x86_64-linux-gnu/libc.so.6(+0x29d90)[0x7bee98a29d90]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x80)[0x7bee98a29e40]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a)[0x64c87181aa3a]

Exiting...
12:16:35 (3834): wrapper (7.17.26016): starting
12:16:35 (3834): wrapper (7.17.26016): starting
12:16:35 (3834): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/31/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)

</stderr_txt>
]]>