Task 99175148

Name	ebola_RdRp_v1_sidock_00537026_r1_s-24.0_0
Workunit	69690117
Created	1 Feb 2026, 0:41:12 UTC
Sent	4 Feb 2026, 4:17:12 UTC
Report deadline	8 Feb 2026, 4:17:12 UTC
Received	4 Feb 2026, 21:23:10 UTC
Server state	Over
Outcome	Success
Client state	Done
Exit status	0 (0x00000000)
Computer ID	31429
Run time	11 hours 47 min 38 sec
CPU time	11 hours 47 min 27 sec
Validate state	Valid
Credit	671.01
Device peak FLOPS	5.88 GFLOPS
Application version	CurieMarieDock 0.2.0 long tasks v2.02 x86_64-pc-linux-gnu
Peak working set size	239.75 MB
Peak swap size	246.71 MB
Peak disk usage	20.45 MB

Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
01:27:53 (3557748): wrapper (7.17.26016): starting
01:27:53 (3557748): wrapper (7.17.26016): starting
01:27:53 (3557748): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/1/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
free(): invalid pointer
SIGABRT: abort called
Stack trace (20 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c)[0x586b87a3ff8c]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x7de2f7045330]
/lib/x86_64-linux-gnu/libc.so.6(pthread_kill+0x11c)[0x7de2f709eb2c]
/lib/x86_64-linux-gnu/libc.so.6(gsignal+0x1e)[0x7de2f704527e]
/lib/x86_64-linux-gnu/libc.so.6(abort+0xdf)[0x7de2f70288ff]
/lib/x86_64-linux-gnu/libc.so.6(+0x297b6)[0x7de2f70297b6]
/lib/x86_64-linux-gnu/libc.so.6(+0xa8ff5)[0x7de2f70a8ff5]
/lib/x86_64-linux-gnu/libc.so.6(+0xab38c)[0x7de2f70ab38c]
/lib/x86_64-linux-gnu/libc.so.6(__libc_free+0x7e)[0x7de2f70addce]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd)[0x586b87a5c3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4)[0x586b87a7b8e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x7de2f7045330]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0xbf)[0x7de2f70ecadf]
/lib/x86_64-linux-gnu/libc.so.6(nanosleep+0x17)[0x7de2f70f9a27]
/lib/x86_64-linux-gnu/libc.so.6(usleep+0x4c)[0x7de2f712975c]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf)[0x586b87a51adf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784)[0x586b87a1e784]
/lib/x86_64-linux-gnu/libc.so.6(+0x2a1ca)[0x7de2f702a1ca]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x8b)[0x7de2f702a28b]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a)[0x586b87a1aa3a]

Exiting...
10:43:56 (5230): wrapper (7.17.26016): starting
10:43:56 (5230): wrapper (7.17.26016): starting
10:43:56 (5230): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/1/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
SIGSEGV: segmentation violation
Stack trace (14 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c)[0x5b3331e3ff8c]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x732713045330]
/lib/x86_64-linux-gnu/libc.so.6(__libc_free+0x25)[0x7327130add75]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd)[0x5b3331e5c3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4)[0x5b3331e7b8e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x732713045330]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0xbf)[0x7327130ecadf]
/lib/x86_64-linux-gnu/libc.so.6(nanosleep+0x17)[0x7327130f9a27]
/lib/x86_64-linux-gnu/libc.so.6(usleep+0x4c)[0x73271312975c]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf)[0x5b3331e51adf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784)[0x5b3331e1e784]
/lib/x86_64-linux-gnu/libc.so.6(+0x2a1ca)[0x73271302a1ca]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x8b)[0x73271302a28b]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a)[0x5b3331e1aa3a]

Exiting...
12:54:19 (55042): wrapper (7.17.26016): starting
12:54:19 (55042): wrapper (7.17.26016): starting
12:54:19 (55042): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/1/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
16:22:58 (55042): cmdock exited; CPU time 12506.459708
16:22:58 (55042): called boinc_finish(0)

</stderr_txt>
]]>