Task 99179249

Name	ebola_RdRp_v1_sidock_00538058_r1_s-24.0_0
Workunit	69694245
Created	1 Feb 2026, 0:44:54 UTC
Sent	4 Feb 2026, 9:05:45 UTC
Report deadline	8 Feb 2026, 9:05:45 UTC
Received	6 Feb 2026, 11:17:48 UTC
Server state	Over
Outcome	Success
Client state	Done
Exit status	0 (0x00000000)
Computer ID	54582
Run time	11 hours 58 min 59 sec
CPU time	11 hours 58 min 37 sec
Validate state	Valid
Credit	584.92
Device peak FLOPS	8.40 GFLOPS
Application version	CurieMarieDock 0.2.0 long tasks v2.02 x86_64-pc-linux-gnu
Peak working set size	240.85 MB
Peak swap size	248.07 MB
Peak disk usage	20.31 MB
Stderr output

<core_client_version>7.24.1</core_client_version>
<![CDATA[
<stderr_txt>
06:52:58 (2656569): wrapper (7.17.26016): starting
06:52:58 (2656569): wrapper (7.17.26016): starting
06:52:58 (2656569): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/10/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
free(): invalid pointer
SIGABRT: abort called
Stack trace (20 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c)[0x629a8163ff8c]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x771babc45330]
/lib/x86_64-linux-gnu/libc.so.6(pthread_kill+0x11c)[0x771babc9eb2c]
/lib/x86_64-linux-gnu/libc.so.6(gsignal+0x1e)[0x771babc4527e]
/lib/x86_64-linux-gnu/libc.so.6(abort+0xdf)[0x771babc288ff]
/lib/x86_64-linux-gnu/libc.so.6(+0x297b6)[0x771babc297b6]
/lib/x86_64-linux-gnu/libc.so.6(+0xa8ff5)[0x771babca8ff5]
/lib/x86_64-linux-gnu/libc.so.6(+0xab38c)[0x771babcab38c]
/lib/x86_64-linux-gnu/libc.so.6(__libc_free+0x7e)[0x771babcaddce]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd)[0x629a8165c3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4)[0x629a8167b8e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x771babc45330]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0xbf)[0x771babcecadf]
/lib/x86_64-linux-gnu/libc.so.6(nanosleep+0x17)[0x771babcf9a27]
/lib/x86_64-linux-gnu/libc.so.6(usleep+0x4c)[0x771babd2975c]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf)[0x629a81651adf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784)[0x629a8161e784]
/lib/x86_64-linux-gnu/libc.so.6(+0x2a1ca)[0x771babc2a1ca]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x8b)[0x771babc2a28b]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a)[0x629a8161aa3a]

Exiting...
15:11:11 (1985): wrapper (7.17.26016): starting
15:11:11 (1985): wrapper (7.17.26016): starting
15:11:11 (1985): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/10/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
free(): invalid pointer
SIGABRT: abort called
Stack trace (20 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c)[0x5d4c4003ff8c]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x7becb9445330]
/lib/x86_64-linux-gnu/libc.so.6(pthread_kill+0x11c)[0x7becb949eb2c]
/lib/x86_64-linux-gnu/libc.so.6(gsignal+0x1e)[0x7becb944527e]
/lib/x86_64-linux-gnu/libc.so.6(abort+0xdf)[0x7becb94288ff]
/lib/x86_64-linux-gnu/libc.so.6(+0x297b6)[0x7becb94297b6]
/lib/x86_64-linux-gnu/libc.so.6(+0xa8ff5)[0x7becb94a8ff5]
/lib/x86_64-linux-gnu/libc.so.6(+0xab38c)[0x7becb94ab38c]
/lib/x86_64-linux-gnu/libc.so.6(__libc_free+0x7e)[0x7becb94addce]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd)[0x5d4c4005c3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4)[0x5d4c4007b8e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x7becb9445330]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0xbf)[0x7becb94ecadf]
/lib/x86_64-linux-gnu/libc.so.6(nanosleep+0x17)[0x7becb94f9a27]
/lib/x86_64-linux-gnu/libc.so.6(usleep+0x4c)[0x7becb952975c]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf)[0x5d4c40051adf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784)[0x5d4c4001e784]
/lib/x86_64-linux-gnu/libc.so.6(+0x2a1ca)[0x7becb942a1ca]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x8b)[0x7becb942a28b]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a)[0x5d4c4001aa3a]

Exiting...
15:13:02 (1975): wrapper (7.17.26016): starting
15:13:02 (1975): wrapper (7.17.26016): starting
15:13:02 (1975): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/10/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
free(): invalid pointer
SIGABRT: abort called
Stack trace (22 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c)[0x6302f103ff8c]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x756bf5e45330]
/lib/x86_64-linux-gnu/libc.so.6(pthread_kill+0x11c)[0x756bf5e9eb2c]
/lib/x86_64-linux-gnu/libc.so.6(gsignal+0x1e)[0x756bf5e4527e]
/lib/x86_64-linux-gnu/libc.so.6(abort+0xdf)[0x756bf5e288ff]
/lib/x86_64-linux-gnu/libc.so.6(+0x297b6)[0x756bf5e297b6]
/lib/x86_64-linux-gnu/libc.so.6(+0xa8ff5)[0x756bf5ea8ff5]
/lib/x86_64-linux-gnu/libc.so.6(+0xab38c)[0x756bf5eab38c]
/lib/x86_64-linux-gnu/libc.so.6(__libc_free+0x7e)[0x756bf5eaddce]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd)[0x6302f105c3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4)[0x6302f107b8e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x756bf5e45330]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3aec0)[0x6302f103aec0]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x756bf5e45330]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0xbf)[0x756bf5eecadf]
/lib/x86_64-linux-gnu/libc.so.6(nanosleep+0x17)[0x756bf5ef9a27]
/lib/x86_64-linux-gnu/libc.so.6(usleep+0x4c)[0x756bf5f2975c]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf)[0x6302f1051adf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784)[0x6302f101e784]
/lib/x86_64-linux-gnu/libc.so.6(+0x2a1ca)[0x756bf5e2a1ca]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x8b)[0x756bf5e2a28b]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a)[0x6302f101aa3a]

Exiting...
15:18:58 (2228): wrapper (7.17.26016): starting
15:18:59 (2228): wrapper (7.17.26016): starting
15:18:59 (2228): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/10/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
free(): invalid pointer
SIGABRT: abort called
Stack trace (20 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c)[0x60345a83ff8c]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x70a4e4a45330]
/lib/x86_64-linux-gnu/libc.so.6(pthread_kill+0x11c)[0x70a4e4a9eb2c]
/lib/x86_64-linux-gnu/libc.so.6(gsignal+0x1e)[0x70a4e4a4527e]
/lib/x86_64-linux-gnu/libc.so.6(abort+0xdf)[0x70a4e4a288ff]
/lib/x86_64-linux-gnu/libc.so.6(+0x297b6)[0x70a4e4a297b6]
/lib/x86_64-linux-gnu/libc.so.6(+0xa8ff5)[0x70a4e4aa8ff5]
/lib/x86_64-linux-gnu/libc.so.6(+0xab38c)[0x70a4e4aab38c]
/lib/x86_64-linux-gnu/libc.so.6(__libc_free+0x7e)[0x70a4e4aaddce]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd)[0x60345a85c3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4)[0x60345a87b8e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x70a4e4a45330]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0xbf)[0x70a4e4aecadf]
/lib/x86_64-linux-gnu/libc.so.6(nanosleep+0x17)[0x70a4e4af9a27]
/lib/x86_64-linux-gnu/libc.so.6(usleep+0x4c)[0x70a4e4b2975c]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf)[0x60345a851adf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784)[0x60345a81e784]
/lib/x86_64-linux-gnu/libc.so.6(+0x2a1ca)[0x70a4e4a2a1ca]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x8b)[0x70a4e4a2a28b]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a)[0x60345a81aa3a]

Exiting...
21:09:35 (53237): wrapper (7.17.26016): starting
21:09:36 (53237): wrapper (7.17.26016): starting
21:09:36 (53237): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/10/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
SIGSEGV: segmentation violation
Stack trace (14 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c)[0x64696aa3ff8c]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x75a2dd245330]
/lib/x86_64-linux-gnu/libc.so.6(__libc_free+0x25)[0x75a2dd2add75]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd)[0x64696aa5c3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4)[0x64696aa7b8e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x75a2dd245330]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0xbf)[0x75a2dd2ecadf]
/lib/x86_64-linux-gnu/libc.so.6(nanosleep+0x17)[0x75a2dd2f9a27]
/lib/x86_64-linux-gnu/libc.so.6(usleep+0x4c)[0x75a2dd32975c]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf)[0x64696aa51adf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784)[0x64696aa1e784]
/lib/x86_64-linux-gnu/libc.so.6(+0x2a1ca)[0x75a2dd22a1ca]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x8b)[0x75a2dd22a28b]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a)[0x64696aa1aa3a]

Exiting...
08:03:04 (1958): wrapper (7.17.26016): starting
08:03:04 (1958): wrapper (7.17.26016): starting
08:03:04 (1958): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/10/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
free(): invalid pointer
SIGABRT: abort called
Stack trace (20 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c)[0x5dec8c03ff8c]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x73d9f4e45330]
/lib/x86_64-linux-gnu/libc.so.6(pthread_kill+0x11c)[0x73d9f4e9eb2c]
/lib/x86_64-linux-gnu/libc.so.6(gsignal+0x1e)[0x73d9f4e4527e]
/lib/x86_64-linux-gnu/libc.so.6(abort+0xdf)[0x73d9f4e288ff]
/lib/x86_64-linux-gnu/libc.so.6(+0x297b6)[0x73d9f4e297b6]
/lib/x86_64-linux-gnu/libc.so.6(+0xa8ff5)[0x73d9f4ea8ff5]
/lib/x86_64-linux-gnu/libc.so.6(+0xab38c)[0x73d9f4eab38c]
/lib/x86_64-linux-gnu/libc.so.6(__libc_free+0x7e)[0x73d9f4eaddce]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd)[0x5dec8c05c3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4)[0x5dec8c07b8e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x73d9f4e45330]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0xbf)[0x73d9f4eecadf]
/lib/x86_64-linux-gnu/libc.so.6(nanosleep+0x17)[0x73d9f4ef9a27]
/lib/x86_64-linux-gnu/libc.so.6(usleep+0x4c)[0x73d9f4f2975c]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf)[0x5dec8c051adf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784)[0x5dec8c01e784]
/lib/x86_64-linux-gnu/libc.so.6(+0x2a1ca)[0x73d9f4e2a1ca]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x8b)[0x73d9f4e2a28b]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a)[0x5dec8c01aa3a]

Exiting...
21:32:07 (141072): wrapper (7.17.26016): starting
21:32:08 (141072): wrapper (7.17.26016): starting
21:32:08 (141072): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/10/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
05:17:36 (141072): cmdock exited; CPU time 21502.811341
05:17:36 (141072): called boinc_finish(0)

</stderr_txt>
]]>