Task 99183574

Name ebola_RdRp_v1_sidock_00539132_r4_s-24.0_0
Workunit 69698544
Created 1 Feb 2026, 0:48:45 UTC
Sent 4 Feb 2026, 13:31:12 UTC
Report deadline 8 Feb 2026, 13:31:12 UTC
Received 6 Feb 2026, 3:52:37 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 77533
Run time 11 hours 20 min 3 sec
CPU time 11 hours 12 min 29 sec
Validate state Valid
Credit 604.10
Device peak FLOPS 8.07 GFLOPS
Application version CurieMarieDock 0.2.0 long tasks v2.02
x86_64-pc-linux-gnu
Peak working set size 241.29 MB
Peak swap size 248.12 MB
Peak disk usage 20.32 MB

Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
22:36:29 (1058257): wrapper (7.17.26016): starting
22:36:29 (1058257): wrapper (7.17.26016): starting
22:36:29 (1058257): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/home/ito-a520m/slots/0/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
free(): invalid size
SIGABRT: abort called
Stack trace (21 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c) [0x556b7ec3ff8c]
/usr/lib/libc.so.6(+0x3e4d0) [0x7f8347e154d0]
/usr/lib/libc.so.6(+0x9890c) [0x7f8347e6f90c]
/usr/lib/libc.so.6(gsignal+0x20) [0x7f8347e153a0]
/usr/lib/libc.so.6(abort+0x26) [0x7f8347dfc57a]
/usr/lib/libc.so.6(+0x26613) [0x7f8347dfd613]
/usr/lib/libc.so.6(+0xa2d25) [0x7f8347e79d25]
/usr/lib/libc.so.6(+0xa2d44) [0x7f8347e79d44]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd) [0x556b7ec5c3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4) [0x556b7ec7b8e4]
/usr/lib/libc.so.6(+0x3e4d0) [0x7f8347e154d0]
/usr/lib/libc.so.6(+0x9efe2) [0x7f8347e75fe2]
/usr/lib/libc.so.6(+0x9316c) [0x7f8347e6a16c]
/usr/lib/libc.so.6(clock_nanosleep+0x32) [0x7f8347ebac12]
/usr/lib/libc.so.6(nanosleep+0x17) [0x7f8347ec6c97]
/usr/lib/libc.so.6(usleep+0x4a) [0x7f8347ef157a]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf) [0x556b7ec51adf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784) [0x556b7ec1e784]
/usr/lib/libc.so.6(+0x27635) [0x7f8347dfe635]
/usr/lib/libc.so.6(__libc_start_main+0x89) [0x7f8347dfe6e9]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a) [0x556b7ec1aa3a]

Exiting...
10:06:00 (12979): wrapper (7.17.26016): starting
10:06:00 (12979): wrapper (7.17.26016): starting
10:06:00 (12979): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/home/ito-a520m/slots/0/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
10:16:38 (79517): wrapper (7.17.26016): starting
10:16:38 (79517): wrapper (7.17.26016): starting
10:16:38 (79517): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/home/ito-a520m/slots/0/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
12:52:15 (79517): cmdock exited; CPU time 7193.650782
12:52:15 (79517): called boinc_finish(0)

</stderr_txt>
]]>


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