Task 99204799

Name ebola_RdRp_v1_sidock_00542488_r2_s-24.0_0
Workunit 69711966
Created 4 Feb 2026, 23:39:13 UTC
Sent 5 Feb 2026, 13:38:39 UTC
Report deadline 9 Feb 2026, 13:38:39 UTC
Received 7 Feb 2026, 12:35:58 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 82724
Run time 13 hours 44 min 35 sec
CPU time 13 hours 35 min 3 sec
Validate state Valid
Credit 392.13
Device peak FLOPS 6.12 GFLOPS
Application version CurieMarieDock 0.2.0 long tasks v2.02
x86_64-pc-linux-gnu
Peak working set size 240.84 MB
Peak swap size 248.37 MB
Peak disk usage 20.28 MB

Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
14:38:43 (239935): wrapper (7.17.26016): starting
14:38:44 (239935): wrapper (7.17.26016): starting
14:38:44 (239935): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc/slots/8/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
SIGSEGV: segmentation violation
Stack trace (16 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c) [0x55cfcaa3ff8c]
/usr/lib/libc.so.6(+0x44900) [0x7fa74aa44900]
/usr/lib/libc.so.6(__libc_free+0x17) [0x7fa74aaba627]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd) [0x55cfcaa5c3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4) [0x55cfcaa7b8e4]
/usr/lib/libc.so.6(+0x44900) [0x7fa74aa44900]
/usr/lib/libc.so.6(+0xb0892) [0x7fa74aab0892]
/usr/lib/libc.so.6(+0xa4248) [0x7fa74aaa4248]
/usr/lib/libc.so.6(clock_nanosleep+0x2e) [0x7fa74aaf544e]
/usr/lib/libc.so.6(nanosleep+0x17) [0x7fa74ab04fa7]
/usr/lib/libc.so.6(usleep+0x47) [0x7fa74ab3ac17]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf) [0x55cfcaa51adf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784) [0x55cfcaa1e784]
/usr/lib/libc.so.6(+0x27b8b) [0x7fa74aa27b8b]
/usr/lib/libc.so.6(__libc_start_main+0x8b) [0x7fa74aa27c4b]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a) [0x55cfcaa1aa3a]

Exiting...
06:30:52 (5810): wrapper (7.17.26016): starting
06:30:52 (5810): wrapper (7.17.26016): starting
06:30:52 (5810): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc/slots/8/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
06:30:52 (5783): wrapper (7.17.26016): starting
06:30:52 (5783): wrapper (7.17.26016): starting
06:30:52 (5783): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc/slots/8/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
13:35:46 (5783): cmdock exited; CPU time 22646.787764
13:35:46 (5783): called boinc_finish(0)

</stderr_txt>
]]>


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