Task 99252131

Name	ebola_RdRp_v1_sidock_00554324_r4_s-24.0_0
Workunit	69759312
Created	5 Feb 2026, 0:21:55 UTC
Sent	7 Feb 2026, 14:31:22 UTC
Report deadline	11 Feb 2026, 14:31:22 UTC
Received	9 Feb 2026, 12:32:05 UTC
Server state	Over
Outcome	Success
Client state	Done
Exit status	0 (0x00000000)
Computer ID	82021
Run time	14 hours 17 min 28 sec
CPU time	14 hours 15 min 3 sec
Validate state	Valid
Credit	677.22
Device peak FLOPS	7.43 GFLOPS
Application version	CurieMarieDock 0.2.0 long tasks v2.02 x86_64-pc-linux-gnu
Peak working set size	240.07 MB
Peak swap size	247.18 MB
Peak disk usage	20.34 MB
Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
14:31:28 (15115): wrapper (7.17.26016): starting
14:31:28 (15115): wrapper (7.17.26016): starting
14:31:28 (15115): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/6/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
15:14:49 (20370): wrapper (7.17.26016): starting
15:14:49 (20370): wrapper (7.17.26016): starting
15:14:49 (20370): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/6/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
16:53:54 (83354): wrapper (7.17.26016): starting
16:53:54 (83354): wrapper (7.17.26016): starting
16:53:54 (83354): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/6/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
16:59:49 (83383): wrapper (7.17.26016): starting
16:59:49 (83383): wrapper (7.17.26016): starting
16:59:49 (83383): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/6/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
17:29:38 (91388): wrapper (7.17.26016): starting
17:29:38 (91388): wrapper (7.17.26016): starting
17:29:38 (91388): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/6/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
17:46:55 (93360): wrapper (7.17.26016): starting
17:46:55 (93360): wrapper (7.17.26016): starting
17:46:55 (93360): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/6/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
18:19:38 (94914): wrapper (7.17.26016): starting
18:19:38 (94914): wrapper (7.17.26016): starting
18:19:38 (94914): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/6/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
18:53:25 (117654): wrapper (7.17.26016): starting
18:53:25 (117654): wrapper (7.17.26016): starting
18:53:25 (117654): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/6/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
19:38:16 (131433): wrapper (7.17.26016): starting
19:38:16 (131433): wrapper (7.17.26016): starting
19:38:16 (131433): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/6/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
19:50:43 (131656): wrapper (7.17.26016): starting
19:50:43 (131656): wrapper (7.17.26016): starting
19:50:43 (131656): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/6/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
21:48:57 (172537): wrapper (7.17.26016): starting
21:48:57 (172537): wrapper (7.17.26016): starting
21:48:57 (172537): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/6/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
22:06:26 (174412): wrapper (7.17.26016): starting
22:06:26 (174412): wrapper (7.17.26016): starting
22:06:26 (174412): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/6/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
08:58:46 (3620): wrapper (7.17.26016): starting
08:58:46 (3620): wrapper (7.17.26016): starting
08:58:46 (3620): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/6/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
09:14:30 (4668): wrapper (7.17.26016): starting
09:14:30 (4668): wrapper (7.17.26016): starting
09:14:30 (4668): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/6/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
09:27:18 (5009): wrapper (7.17.26016): starting
09:27:19 (5009): wrapper (7.17.26016): starting
09:27:19 (5009): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/6/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
09:31:14 (5063): wrapper (7.17.26016): starting
09:31:14 (5063): wrapper (7.17.26016): starting
09:31:14 (5063): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/6/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
SIGSEGV: segmentation violation
Stack trace (16 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c) [0x561a4923ff8c]
/lib/x86_64-linux-gnu/libc.so.6(+0x3fdf0) [0x7fd121458df0]
/lib/x86_64-linux-gnu/libc.so.6(__libc_free+0x22) [0x7fd1214bc262]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd) [0x561a4925c3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4) [0x561a4927b8e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x3fdf0) [0x7fd121458df0]
/lib/x86_64-linux-gnu/libc.so.6(+0x9a9ee) [0x7fd1214b39ee]
/lib/x86_64-linux-gnu/libc.so.6(+0x8f668) [0x7fd1214a8668]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0x2a) [0x7fd1214f4f7a]
/lib/x86_64-linux-gnu/libc.so.6(nanosleep+0x13) [0x7fd121500393]
/lib/x86_64-linux-gnu/libc.so.6(usleep+0x43) [0x7fd121529373]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf) [0x561a49251adf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784) [0x561a4921e784]
/lib/x86_64-linux-gnu/libc.so.6(+0x29ca8) [0x7fd121442ca8]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x85) [0x7fd121442d65]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a) [0x561a4921aa3a]

Exiting...
13:38:21 (2447): wrapper (7.17.26016): starting
13:38:21 (2447): wrapper (7.17.26016): starting
13:38:21 (2447): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/6/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
SIGSEGV: segmentation violation
Stack trace (16 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c) [0x5582e6c3ff8c]
/lib/x86_64-linux-gnu/libc.so.6(+0x3fdf0) [0x7f0b3d7fddf0]
/lib/x86_64-linux-gnu/libc.so.6(__libc_free+0x22) [0x7f0b3d861262]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd) [0x5582e6c5c3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4) [0x5582e6c7b8e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x3fdf0) [0x7f0b3d7fddf0]
/lib/x86_64-linux-gnu/libc.so.6(+0x9a9ee) [0x7f0b3d8589ee]
/lib/x86_64-linux-gnu/libc.so.6(+0x8f668) [0x7f0b3d84d668]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0x2a) [0x7f0b3d899f7a]
/lib/x86_64-linux-gnu/libc.so.6(nanosleep+0x13) [0x7f0b3d8a5393]
/lib/x86_64-linux-gnu/libc.so.6(usleep+0x43) [0x7f0b3d8ce373]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf) [0x5582e6c51adf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784) [0x5582e6c1e784]
/lib/x86_64-linux-gnu/libc.so.6(+0x29ca8) [0x7f0b3d7e7ca8]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x85) [0x7f0b3d7e7d65]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a) [0x5582e6c1aa3a]

Exiting...
11:45:48 (2479): wrapper (7.17.26016): starting
11:45:49 (2479): wrapper (7.17.26016): starting
11:45:49 (2479): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/6/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
12:31:52 (2479): cmdock exited; CPU time 2760.717077
12:31:52 (2479): called boinc_finish(0)

</stderr_txt>
]]>