Task 99252142

Name	ebola_RdRp_v1_sidock_00554305_r1_s-24.0_0
Workunit	69759233
Created	5 Feb 2026, 0:21:55 UTC
Sent	7 Feb 2026, 14:31:22 UTC
Report deadline	11 Feb 2026, 14:31:22 UTC
Received	9 Feb 2026, 14:32:13 UTC
Server state	Over
Outcome	Success
Client state	Done
Exit status	0 (0x00000000)
Computer ID	82021
Run time	14 hours 45 min 29 sec
CPU time	14 hours 43 min 2 sec
Validate state	Valid
Credit	697.36
Device peak FLOPS	7.43 GFLOPS
Application version	CurieMarieDock 0.2.0 long tasks v2.02 x86_64-pc-linux-gnu
Peak working set size	240.60 MB
Peak swap size	247.87 MB
Peak disk usage	20.31 MB
Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
14:31:30 (15120): wrapper (7.17.26016): starting
14:31:30 (15120): wrapper (7.17.26016): starting
14:31:30 (15120): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/7/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
15:14:49 (20371): wrapper (7.17.26016): starting
15:14:49 (20371): wrapper (7.17.26016): starting
15:14:49 (20371): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/7/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
16:53:54 (83355): wrapper (7.17.26016): starting
16:53:54 (83355): wrapper (7.17.26016): starting
16:53:54 (83355): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/7/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
16:59:49 (83384): wrapper (7.17.26016): starting
16:59:49 (83384): wrapper (7.17.26016): starting
16:59:49 (83384): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/7/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
17:29:38 (91389): wrapper (7.17.26016): starting
17:29:38 (91389): wrapper (7.17.26016): starting
17:29:38 (91389): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/7/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
17:46:55 (93361): wrapper (7.17.26016): starting
17:46:55 (93361): wrapper (7.17.26016): starting
17:46:55 (93361): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/7/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
18:19:38 (94915): wrapper (7.17.26016): starting
18:19:38 (94915): wrapper (7.17.26016): starting
18:19:38 (94915): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/7/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
18:53:25 (117655): wrapper (7.17.26016): starting
18:53:25 (117655): wrapper (7.17.26016): starting
18:53:25 (117655): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/7/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
19:38:16 (131434): wrapper (7.17.26016): starting
19:38:16 (131434): wrapper (7.17.26016): starting
19:38:16 (131434): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/7/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
19:50:43 (131657): wrapper (7.17.26016): starting
19:50:43 (131657): wrapper (7.17.26016): starting
19:50:43 (131657): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/7/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
21:48:57 (172538): wrapper (7.17.26016): starting
21:48:57 (172538): wrapper (7.17.26016): starting
21:48:57 (172538): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/7/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
22:06:26 (174413): wrapper (7.17.26016): starting
22:06:26 (174413): wrapper (7.17.26016): starting
22:06:26 (174413): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/7/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
08:58:46 (3621): wrapper (7.17.26016): starting
08:58:46 (3621): wrapper (7.17.26016): starting
08:58:46 (3621): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/7/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
09:14:30 (4669): wrapper (7.17.26016): starting
09:14:30 (4669): wrapper (7.17.26016): starting
09:14:30 (4669): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/7/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
09:27:18 (5010): wrapper (7.17.26016): starting
09:27:19 (5010): wrapper (7.17.26016): starting
09:27:19 (5010): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/7/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
09:31:14 (5064): wrapper (7.17.26016): starting
09:31:14 (5064): wrapper (7.17.26016): starting
09:31:14 (5064): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/7/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
SIGSEGV: segmentation violation
Stack trace (16 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c) [0x555a65c3ff8c]
/lib/x86_64-linux-gnu/libc.so.6(+0x3fdf0) [0x7fc2d76cfdf0]
/lib/x86_64-linux-gnu/libc.so.6(__libc_free+0x22) [0x7fc2d7733262]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd) [0x555a65c5c3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4) [0x555a65c7b8e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x3fdf0) [0x7fc2d76cfdf0]
/lib/x86_64-linux-gnu/libc.so.6(+0x9a9ee) [0x7fc2d772a9ee]
/lib/x86_64-linux-gnu/libc.so.6(+0x8f668) [0x7fc2d771f668]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0x2a) [0x7fc2d776bf7a]
/lib/x86_64-linux-gnu/libc.so.6(nanosleep+0x13) [0x7fc2d7777393]
/lib/x86_64-linux-gnu/libc.so.6(usleep+0x43) [0x7fc2d77a0373]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf) [0x555a65c51adf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784) [0x555a65c1e784]
/lib/x86_64-linux-gnu/libc.so.6(+0x29ca8) [0x7fc2d76b9ca8]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x85) [0x7fc2d76b9d65]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a) [0x555a65c1aa3a]

Exiting...
13:38:21 (2448): wrapper (7.17.26016): starting
13:38:21 (2448): wrapper (7.17.26016): starting
13:38:21 (2448): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/7/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
SIGSEGV: segmentation violation
Stack trace (16 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c) [0x5571bda3ff8c]
/lib/x86_64-linux-gnu/libc.so.6(+0x3fdf0) [0x7fbb33db8df0]
/lib/x86_64-linux-gnu/libc.so.6(__libc_free+0x22) [0x7fbb33e1c262]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd) [0x5571bda5c3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4) [0x5571bda7b8e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x3fdf0) [0x7fbb33db8df0]
/lib/x86_64-linux-gnu/libc.so.6(+0x9a9ee) [0x7fbb33e139ee]
/lib/x86_64-linux-gnu/libc.so.6(+0x8f668) [0x7fbb33e08668]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0x2a) [0x7fbb33e54f7a]
/lib/x86_64-linux-gnu/libc.so.6(nanosleep+0x13) [0x7fbb33e60393]
/lib/x86_64-linux-gnu/libc.so.6(usleep+0x43) [0x7fbb33e89373]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf) [0x5571bda51adf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784) [0x5571bda1e784]
/lib/x86_64-linux-gnu/libc.so.6(+0x29ca8) [0x7fbb33da2ca8]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x85) [0x7fbb33da2d65]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a) [0x5571bda1aa3a]

Exiting...
11:45:48 (2480): wrapper (7.17.26016): starting
11:45:49 (2480): wrapper (7.17.26016): starting
11:45:49 (2480): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/7/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
SIGSEGV: segmentation violation
Stack trace (16 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c) [0x55dabd83ff8c]
/lib/x86_64-linux-gnu/libc.so.6(+0x3fdf0) [0x7f2578ca8df0]
/lib/x86_64-linux-gnu/libc.so.6(__libc_free+0x22) [0x7f2578d0c262]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd) [0x55dabd85c3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4) [0x55dabd87b8e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x3fdf0) [0x7f2578ca8df0]
/lib/x86_64-linux-gnu/libc.so.6(+0x9a9ee) [0x7f2578d039ee]
/lib/x86_64-linux-gnu/libc.so.6(+0x8f668) [0x7f2578cf8668]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0x2a) [0x7f2578d44f7a]
/lib/x86_64-linux-gnu/libc.so.6(nanosleep+0x13) [0x7f2578d50393]
/lib/x86_64-linux-gnu/libc.so.6(usleep+0x43) [0x7f2578d79373]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf) [0x55dabd851adf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784) [0x55dabd81e784]
/lib/x86_64-linux-gnu/libc.so.6(+0x29ca8) [0x7f2578c92ca8]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x85) [0x7f2578c92d65]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a) [0x55dabd81aa3a]

Exiting...
14:12:18 (2463): wrapper (7.17.26016): starting
14:12:19 (2463): wrapper (7.17.26016): starting
14:12:19 (2463): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/7/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
14:32:03 (2463): cmdock exited; CPU time 1181.464553
14:32:03 (2463): called boinc_finish(0)

</stderr_txt>
]]>