Task 99679876

Name ebola_RdRp_v1_sidock_00651017_r3_s-24.0_0
Workunit 70146083
Created 25 Feb 2026, 12:36:51 UTC
Sent 27 Feb 2026, 17:35:06 UTC
Report deadline 3 Mar 2026, 17:35:06 UTC
Received 28 Feb 2026, 22:31:50 UTC
Server state Over
Outcome Validate error
Client state Done
Exit status 0 (0x00000000)
Computer ID 81825
Run time 2 sec
CPU time 2 sec
Validate state Invalid
Credit 0.00
Device peak FLOPS 4.53 GFLOPS
Application version CurieMarieDock 0.2.0 long tasks v2.02
x86_64-pc-linux-gnu
Peak working set size 33.71 MB
Peak swap size 41.63 MB
Peak disk usage 20.31 MB

Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
19:34:51 (19361): wrapper (7.17.26016): starting
19:34:51 (19361): wrapper (7.17.26016): starting
19:34:51 (19361): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc/slots/15/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
free(): invalid pointer
SIGABRT: abort called
Stack trace (20 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c)[0x5af28883ff8c]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x720336045330]
/lib/x86_64-linux-gnu/libc.so.6(pthread_kill+0x11c)[0x72033609eb2c]
/lib/x86_64-linux-gnu/libc.so.6(gsignal+0x1e)[0x72033604527e]
/lib/x86_64-linux-gnu/libc.so.6(abort+0xdf)[0x7203360288ff]
/lib/x86_64-linux-gnu/libc.so.6(+0x297b6)[0x7203360297b6]
/lib/x86_64-linux-gnu/libc.so.6(+0xa8ff5)[0x7203360a8ff5]
/lib/x86_64-linux-gnu/libc.so.6(+0xab38c)[0x7203360ab38c]
/lib/x86_64-linux-gnu/libc.so.6(__libc_free+0x7e)[0x7203360addce]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd)[0x5af28885c3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4)[0x5af28887b8e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x720336045330]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0xbf)[0x7203360ecadf]
/lib/x86_64-linux-gnu/libc.so.6(nanosleep+0x17)[0x7203360f9a27]
/lib/x86_64-linux-gnu/libc.so.6(usleep+0x4c)[0x72033612975c]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf)[0x5af288851adf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784)[0x5af28881e784]
/lib/x86_64-linux-gnu/libc.so.6(+0x2a1ca)[0x72033602a1ca]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x8b)[0x72033602a28b]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a)[0x5af28881aa3a]

Exiting...
23:31:25 (13572): wrapper (7.17.26016): starting
23:31:25 (13572): wrapper (7.17.26016): starting
23:31:25 (13572): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc/slots/15/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
23:31:36 (13572): cmdock exited; CPU time 2.525783
23:31:36 (13572): called boinc_finish(0)

</stderr_txt>
]]>


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