Task 99693198

Name ebola_RdRp_v1_sidock_00654343_r3_s-24.0_0
Workunit 70159387
Created 25 Feb 2026, 12:47:56 UTC
Sent 28 Feb 2026, 11:44:24 UTC
Report deadline 4 Mar 2026, 11:44:24 UTC
Received 28 Feb 2026, 12:35:26 UTC
Server state Over
Outcome Validate error
Client state Done
Exit status 0 (0x00000000)
Computer ID 82519
Run time 3 min 31 sec
CPU time 3 min 21 sec
Validate state Invalid
Credit 0.00
Device peak FLOPS 3.71 GFLOPS
Application version CurieMarieDock 0.2.0 long tasks v2.02
x86_64-pc-linux-gnu
Peak working set size 237.18 MB
Peak swap size 243.51 MB
Peak disk usage 20.18 MB

Stderr output

<core_client_version>8.3.0</core_client_version>
<![CDATA[
<stderr_txt>
13:23:17 (3123): wrapper (7.17.26016): starting
13:23:17 (3123): wrapper (7.17.26016): starting
13:23:17 (3123): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc/slots/39/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
free(): invalid pointer
SIGABRT: abort called
Stack trace (20 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c)[0x563c3c43ff8c]
/lib/x86_64-linux-gnu/libc.so.6(+0x3c050)[0x7f229fe58050]
/lib/x86_64-linux-gnu/libc.so.6(+0x8aeec)[0x7f229fea6eec]
/lib/x86_64-linux-gnu/libc.so.6(gsignal+0x12)[0x7f229fe57fb2]
/lib/x86_64-linux-gnu/libc.so.6(abort+0xd3)[0x7f229fe42472]
/lib/x86_64-linux-gnu/libc.so.6(+0x7f42f)[0x7f229fe9b42f]
/lib/x86_64-linux-gnu/libc.so.6(+0x9486a)[0x7f229feb086a]
/lib/x86_64-linux-gnu/libc.so.6(+0x965f4)[0x7f229feb25f4]
/lib/x86_64-linux-gnu/libc.so.6(__libc_free+0x6f)[0x7f229feb4f4f]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd)[0x563c3c45c3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4)[0x563c3c47b8e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x3c050)[0x7f229fe58050]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0x65)[0x7f229feeb545]
/lib/x86_64-linux-gnu/libc.so.6(nanosleep+0x13)[0x7f229feefe53]
/lib/x86_64-linux-gnu/libc.so.6(usleep+0x45)[0x7f229ff1b285]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf)[0x563c3c451adf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784)[0x563c3c41e784]
/lib/x86_64-linux-gnu/libc.so.6(+0x2724a)[0x7f229fe4324a]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x85)[0x7f229fe43305]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a)[0x563c3c41aa3a]

Exiting...
13:28:49 (3059): wrapper (7.17.26016): starting
13:28:49 (3059): wrapper (7.17.26016): starting
13:28:49 (3059): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc/slots/39/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
13:31:13 (3057): wrapper (7.17.26016): starting
13:31:13 (3057): wrapper (7.17.26016): starting
13:31:13 (3057): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc/slots/39/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
13:31:19 (3057): cmdock exited; CPU time 4.897327
13:31:19 (3057): called boinc_finish(0)

</stderr_txt>
]]>


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