Task 99712283

Name ebola_RdRp_v1_sidock_00659103_r4_s-24.0_0
Workunit 70178428
Created 25 Feb 2026, 13:03:31 UTC
Sent 1 Mar 2026, 10:03:37 UTC
Report deadline 5 Mar 2026, 10:03:37 UTC
Received 1 Mar 2026, 12:00:14 UTC
Server state Over
Outcome Validate error
Client state Done
Exit status 0 (0x00000000)
Computer ID 83490
Run time 1 hours 6 min 41 sec
CPU time 1 hours 5 min 16 sec
Validate state Invalid
Credit 0.00
Device peak FLOPS 3.79 GFLOPS
Application version CurieMarieDock 0.2.0 long tasks v2.02
x86_64-pc-linux-gnu
Peak working set size 239.42 MB
Peak swap size 247.02 MB
Peak disk usage 20.25 MB

Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
13:03:42 (32843): wrapper (7.17.26016): starting
13:03:43 (32843): wrapper (7.17.26016): starting
13:03:43 (32843): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc/slots/13/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
free(): invalid pointer
SIGABRT: abort called
Stack trace (20 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c)[0x5d673543ff8c]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x727c7b045330]
/lib/x86_64-linux-gnu/libc.so.6(pthread_kill+0x11c)[0x727c7b09eb2c]
/lib/x86_64-linux-gnu/libc.so.6(gsignal+0x1e)[0x727c7b04527e]
/lib/x86_64-linux-gnu/libc.so.6(abort+0xdf)[0x727c7b0288ff]
/lib/x86_64-linux-gnu/libc.so.6(+0x297b6)[0x727c7b0297b6]
/lib/x86_64-linux-gnu/libc.so.6(+0xa8ff5)[0x727c7b0a8ff5]
/lib/x86_64-linux-gnu/libc.so.6(+0xab38c)[0x727c7b0ab38c]
/lib/x86_64-linux-gnu/libc.so.6(__libc_free+0x7e)[0x727c7b0addae]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd)[0x5d673545c3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4)[0x5d673547b8e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x727c7b045330]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0xbf)[0x727c7b0ecadf]
/lib/x86_64-linux-gnu/libc.so.6(nanosleep+0x17)[0x727c7b0f9a27]
/lib/x86_64-linux-gnu/libc.so.6(usleep+0x4c)[0x727c7b12975c]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf)[0x5d6735451adf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784)[0x5d673541e784]
/lib/x86_64-linux-gnu/libc.so.6(+0x2a1ca)[0x727c7b02a1ca]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x8b)[0x727c7b02a28b]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a)[0x5d673541aa3a]

Exiting...
13:21:07 (2805): wrapper (7.17.26016): starting
13:21:07 (2805): wrapper (7.17.26016): starting
13:21:07 (2805): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc/slots/13/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
13:53:07 (2791): wrapper (7.17.26016): starting
13:53:07 (2791): wrapper (7.17.26016): starting
13:53:07 (2791): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc/slots/13/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
14:23:50 (2803): wrapper (7.17.26016): starting
14:23:50 (2803): wrapper (7.17.26016): starting
14:23:50 (2803): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc/slots/13/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
14:40:27 (2811): wrapper (7.17.26016): starting
14:40:27 (2811): wrapper (7.17.26016): starting
14:40:27 (2811): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc/slots/13/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
14:40:34 (2811): cmdock exited; CPU time 6.053611
14:40:34 (2811): called boinc_finish(0)

</stderr_txt>
]]>


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