Task 99793681

Name ebola_RdRp_v1_sidock_00677126_r1_s-24.0_0
Workunit 70250517
Created 1 Mar 2026, 23:06:01 UTC
Sent 5 Mar 2026, 12:05:09 UTC
Report deadline 9 Mar 2026, 12:05:09 UTC
Received 7 Mar 2026, 5:26:32 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 46694
Run time 9 hours 19 min 41 sec
CPU time 9 hours 19 min 41 sec
Validate state Valid
Credit 611.09
Device peak FLOPS 6.81 GFLOPS
Application version CurieMarieDock 0.2.0 long tasks v2.02
x86_64-pc-linux-gnu
Peak working set size 240.88 MB
Peak swap size 246.63 MB
Peak disk usage 20.39 MB

Stderr output

<core_client_version>7.14.2</core_client_version>
<![CDATA[
<stderr_txt>
03:15:14 (2389): wrapper (7.17.26016): starting
03:15:14 (2389): wrapper (7.17.26016): starting
03:15:14 (2389): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/13/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
free(): invalid pointer
SIGABRT: abort called
Stack trace (16 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c)[0x562ce49bff8c]
/lib/x86_64-linux-gnu/libpthread.so.0(+0x12730)[0x7fb41db44730]
/lib/x86_64-linux-gnu/libc.so.6(gsignal+0x10b)[0x7fb41d9a98eb]
/lib/x86_64-linux-gnu/libc.so.6(abort+0x121)[0x7fb41d994535]
/lib/x86_64-linux-gnu/libc.so.6(+0x79648)[0x7fb41d9eb648]
/lib/x86_64-linux-gnu/libc.so.6(+0x7fd6a)[0x7fb41d9f1d6a]
/lib/x86_64-linux-gnu/libc.so.6(+0x8159c)[0x7fb41d9f359c]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd)[0x562ce49dc3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4)[0x562ce49fb8e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x37970)[0x7fb41d9a9970]
/lib/x86_64-linux-gnu/libc.so.6(nanosleep+0x40)[0x7fb41da385c0]
/lib/x86_64-linux-gnu/libc.so.6(usleep+0x44)[0x7fb41da63414]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf)[0x562ce49d1adf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784)[0x562ce499e784]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0xeb)[0x7fb41d99609b]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a)[0x562ce499aa3a]

Exiting...
19:47:11 (1429): wrapper (7.17.26016): starting
19:47:12 (1429): wrapper (7.17.26016): starting
19:47:12 (1429): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/13/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
00:26:21 (1429): cmdock exited; CPU time 18587.676582
00:26:21 (1429): called boinc_finish(0)

</stderr_txt>
]]>


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