Task 99794636

Name ebola_RdRp_v1_sidock_00677364_r1_s-24.0_0
Workunit 70251469
Created 1 Mar 2026, 23:06:46 UTC
Sent 5 Mar 2026, 13:14:54 UTC
Report deadline 9 Mar 2026, 13:14:54 UTC
Received 9 Mar 2026, 7:44:58 UTC
Server state Over
Outcome Computation error
Client state Aborted by user
Exit status 203 (0x000000CB) EXIT_ABORTED_VIA_GUI
Computer ID 83170
Run time 5 hours 16 min 44 sec
CPU time 5 hours 0 min 46 sec
Validate state Invalid
Credit 0.00
Device peak FLOPS 7.64 GFLOPS
Application version CurieMarieDock 0.2.0 long tasks v2.02
x86_64-pc-linux-gnu
Peak working set size 238.52 MB
Peak swap size 246.05 MB
Peak disk usage 20.15 MB

Stderr output

<core_client_version>8.2.4</core_client_version>
<![CDATA[
<message>
aborted by user</message>
<stderr_txt>
15:14:59 (1594378): wrapper (7.17.26016): starting
15:14:59 (1594378): wrapper (7.17.26016): starting
15:14:59 (1594378): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc/slots/0/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
free(): invalid size
SIGABRT: abort called
Stack trace (21 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c) [0x5595e4c3ff8c]
/lib64/libc.so.6(+0x1a290) [0x7f12deb67290]
/lib64/libc.so.6(+0x743cc) [0x7f12debc13cc]
/lib64/libc.so.6(gsignal+0x1e) [0x7f12deb6715e]
/lib64/libc.so.6(abort+0x26) [0x7f12deb4e6d0]
/lib64/libc.so.6(+0x273b) [0x7f12deb4f73b]
/lib64/libc.so.6(+0x7e665) [0x7f12debcb665]
/lib64/libc.so.6(+0x7e684) [0x7f12debcb684]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd) [0x5595e4c5c3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4) [0x5595e4c7b8e4]
/lib64/libc.so.6(+0x1a290) [0x7f12deb67290]
/lib64/libc.so.6(+0x7a9a2) [0x7f12debc79a2]
/lib64/libc.so.6(+0x6ec3c) [0x7f12debbbc3c]
/lib64/libc.so.6(clock_nanosleep+0x32) [0x7f12dec0bba2]
/lib64/libc.so.6(nanosleep+0x17) [0x7f12dec17b77]
/lib64/libc.so.6(usleep+0x4a) [0x7f12dec4217a]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf) [0x5595e4c51adf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784) [0x5595e4c1e784]
/lib64/libc.so.6(+0x35b5) [0x7f12deb505b5]
/lib64/libc.so.6(__libc_start_main+0x88) [0x7f12deb50668]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a) [0x5595e4c1aa3a]

Exiting...
11:54:52 (5462): wrapper (7.17.26016): starting
11:54:52 (5462): wrapper (7.17.26016): starting
11:54:52 (5462): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc/slots/0/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
15:48:04 (820676): wrapper (7.17.26016): starting
15:48:04 (820676): wrapper (7.17.26016): starting
15:48:04 (820676): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc/slots/0/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
09:11:24 (9343): wrapper (7.17.26016): starting
09:11:24 (9343): wrapper (7.17.26016): starting
09:11:24 (9343): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc/slots/0/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)

</stderr_txt>
]]>


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