Task 99927343

Name ebola_RdRp_v1_sidock_00705928_r4_s-24.0_0
Workunit 70365728
Created 11 Mar 2026, 0:29:49 UTC
Sent 12 Mar 2026, 4:35:49 UTC
Report deadline 16 Mar 2026, 4:35:49 UTC
Received 14 Mar 2026, 4:46:03 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 54584
Run time 8 hours 18 min 1 sec
CPU time 8 hours 17 min 51 sec
Validate state Valid
Credit 571.40
Device peak FLOPS 9.87 GFLOPS
Application version CurieMarieDock 0.2.0 long tasks v2.02
x86_64-pc-linux-gnu
Peak working set size 239.88 MB
Peak swap size 247.57 MB
Peak disk usage 20.53 MB

Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
03:12:24 (40714): wrapper (7.17.26016): starting
03:12:24 (40714): wrapper (7.17.26016): starting
03:12:24 (40714): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/31/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
free(): invalid pointer
SIGABRT: abort called
Stack trace (20 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c)[0x5eca8e63ff8c]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x72d895445330]
/lib/x86_64-linux-gnu/libc.so.6(pthread_kill+0x11c)[0x72d89549eb2c]
/lib/x86_64-linux-gnu/libc.so.6(gsignal+0x1e)[0x72d89544527e]
/lib/x86_64-linux-gnu/libc.so.6(abort+0xdf)[0x72d8954288ff]
/lib/x86_64-linux-gnu/libc.so.6(+0x297b6)[0x72d8954297b6]
/lib/x86_64-linux-gnu/libc.so.6(+0xa8ff5)[0x72d8954a8ff5]
/lib/x86_64-linux-gnu/libc.so.6(+0xab38c)[0x72d8954ab38c]
/lib/x86_64-linux-gnu/libc.so.6(__libc_free+0x7e)[0x72d8954addce]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd)[0x5eca8e65c3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4)[0x5eca8e67b8e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x72d895445330]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0xbf)[0x72d8954ecadf]
/lib/x86_64-linux-gnu/libc.so.6(nanosleep+0x17)[0x72d8954f9a27]
/lib/x86_64-linux-gnu/libc.so.6(usleep+0x4c)[0x72d89552975c]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf)[0x5eca8e651adf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784)[0x5eca8e61e784]
/lib/x86_64-linux-gnu/libc.so.6(+0x2a1ca)[0x72d89542a1ca]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x8b)[0x72d89542a28b]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a)[0x5eca8e61aa3a]

Exiting...
09:55:33 (2749): wrapper (7.17.26016): starting
09:55:33 (2749): wrapper (7.17.26016): starting
09:55:33 (2749): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/31/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
21:36:07 (2754): wrapper (7.17.26016): starting
21:36:07 (2754): wrapper (7.17.26016): starting
21:36:07 (2754): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/31/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
23:45:48 (2754): cmdock exited; CPU time 7779.090048
23:45:48 (2754): called boinc_finish(0)

</stderr_txt>
]]>


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