Task 99951882

Name ebola_RdRp_v1_sidock_00712062_r1_s-24.0_0
Workunit 70390261
Created 11 Mar 2026, 0:50:12 UTC
Sent 13 Mar 2026, 2:17:11 UTC
Report deadline 17 Mar 2026, 2:17:11 UTC
Received 14 Mar 2026, 7:05:16 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 60430
Run time 8 hours 30 min 28 sec
CPU time 8 hours 30 min 18 sec
Validate state Valid
Credit 613.41
Device peak FLOPS 9.62 GFLOPS
Application version CurieMarieDock 0.2.0 long tasks v2.02
x86_64-pc-linux-gnu
Peak working set size 240.66 MB
Peak swap size 247.50 MB
Peak disk usage 20.18 MB

Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
10:11:39 (9674): wrapper (7.17.26016): starting
10:11:39 (9674): wrapper (7.17.26016): starting
10:11:39 (9674): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/3/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
free(): invalid pointer
SIGABRT: abort called
Stack trace (20 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c)[0x57895003ff8c]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x7ee5cae45330]
/lib/x86_64-linux-gnu/libc.so.6(pthread_kill+0x11c)[0x7ee5cae9eb2c]
/lib/x86_64-linux-gnu/libc.so.6(gsignal+0x1e)[0x7ee5cae4527e]
/lib/x86_64-linux-gnu/libc.so.6(abort+0xdf)[0x7ee5cae288ff]
/lib/x86_64-linux-gnu/libc.so.6(+0x297b6)[0x7ee5cae297b6]
/lib/x86_64-linux-gnu/libc.so.6(+0xa8ff5)[0x7ee5caea8ff5]
/lib/x86_64-linux-gnu/libc.so.6(+0xab38c)[0x7ee5caeab38c]
/lib/x86_64-linux-gnu/libc.so.6(__libc_free+0x7e)[0x7ee5caeaddce]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd)[0x57895005c3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4)[0x57895007b8e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x7ee5cae45330]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0xbf)[0x7ee5caeecadf]
/lib/x86_64-linux-gnu/libc.so.6(nanosleep+0x17)[0x7ee5caef9a27]
/lib/x86_64-linux-gnu/libc.so.6(usleep+0x4c)[0x7ee5caf2975c]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf)[0x578950051adf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784)[0x57895001e784]
/lib/x86_64-linux-gnu/libc.so.6(+0x2a1ca)[0x7ee5cae2a1ca]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x8b)[0x7ee5cae2a28b]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a)[0x57895001aa3a]

Exiting...
21:00:03 (86999): wrapper (7.17.26016): starting
21:00:03 (86999): wrapper (7.17.26016): starting
21:00:03 (86999): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/3/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
02:05:05 (86999): cmdock exited; CPU time 17628.152158
02:05:05 (86999): called boinc_finish(0)

</stderr_txt>
]]>


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