Task 99968251

Name ebola_RdRp_v1_sidock_00716151_r1_s-24.0_0
Workunit 70406617
Created 11 Mar 2026, 1:03:29 UTC
Sent 13 Mar 2026, 17:48:04 UTC
Report deadline 17 Mar 2026, 17:48:04 UTC
Received 15 Mar 2026, 9:41:14 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 76200
Run time 8 hours 10 min 11 sec
CPU time 8 hours 10 min 5 sec
Validate state Valid
Credit 608.12
Device peak FLOPS 10.36 GFLOPS
Application version CurieMarieDock 0.2.0 long tasks v2.02
x86_64-pc-linux-gnu
Peak working set size 238.11 MB
Peak swap size 245.26 MB
Peak disk usage 20.29 MB

Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
17:46:29 (6377): wrapper (7.17.26016): starting
17:46:29 (6377): wrapper (7.17.26016): starting
17:46:29 (6377): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/13/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
free(): invalid pointer
SIGABRT: abort called
Stack trace (20 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c)[0x5cc1e4c3ff8c]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x78be10245330]
/lib/x86_64-linux-gnu/libc.so.6(pthread_kill+0x11c)[0x78be1029eb2c]
/lib/x86_64-linux-gnu/libc.so.6(gsignal+0x1e)[0x78be1024527e]
/lib/x86_64-linux-gnu/libc.so.6(abort+0xdf)[0x78be102288ff]
/lib/x86_64-linux-gnu/libc.so.6(+0x297b6)[0x78be102297b6]
/lib/x86_64-linux-gnu/libc.so.6(+0xa8ff5)[0x78be102a8ff5]
/lib/x86_64-linux-gnu/libc.so.6(+0xab38c)[0x78be102ab38c]
/lib/x86_64-linux-gnu/libc.so.6(__libc_free+0x7e)[0x78be102addce]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd)[0x5cc1e4c5c3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4)[0x5cc1e4c7b8e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x78be10245330]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0xbf)[0x78be102ecadf]
/lib/x86_64-linux-gnu/libc.so.6(nanosleep+0x17)[0x78be102f9a27]
/lib/x86_64-linux-gnu/libc.so.6(sleep+0x43)[0x78be1030ec93]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51a9a)[0x5cc1e4c51a9a]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784)[0x5cc1e4c1e784]
/lib/x86_64-linux-gnu/libc.so.6(+0x2a1ca)[0x78be1022a1ca]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x8b)[0x78be1022a28b]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a)[0x5cc1e4c1aa3a]

Exiting...
14:13:11 (28009): wrapper (7.17.26016): starting
14:13:11 (28009): wrapper (7.17.26016): starting
14:13:11 (28009): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/13/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
21:00:11 (36196): wrapper (7.17.26016): starting
21:00:11 (36196): wrapper (7.17.26016): starting
21:00:11 (36196): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/13/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
04:41:01 (36196): cmdock exited; CPU time 26415.233677
04:41:01 (36196): called boinc_finish(0)

</stderr_txt>
]]>


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