Task 99983283

Name ebola_RdRp_v1_sidock_00719912_r4_s-24.0_0
Workunit 70421664
Created 11 Mar 2026, 1:16:02 UTC
Sent 14 Mar 2026, 8:13:21 UTC
Report deadline 18 Mar 2026, 8:13:21 UTC
Received 15 Mar 2026, 11:29:15 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 83771
Run time 1 days 2 hours 18 min 24 sec
CPU time 1 days 1 hours 48 min 1 sec
Validate state Valid
Credit 494.89
Device peak FLOPS 1.00 GFLOPS
Application version CurieMarieDock 0.2.0 long tasks v2.02
x86_64-pc-linux-gnu
Peak working set size 239.13 MB
Peak swap size 246.15 MB
Peak disk usage 20.27 MB

Stderr output

<core_client_version>8.2.4</core_client_version>
<![CDATA[
<stderr_txt>
03:01:44 (132965): wrapper (7.17.26016): starting
03:01:44 (132965): wrapper (7.17.26016): starting
03:01:44 (132965): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc/slots/3/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
SIGSEGV: segmentation violation
Stack trace (18 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c) [0x55ac6383ff8c]
/lib64/libc.so.6(+0x1a290) [0x7fc63dcb6290]
/lib64/libc.so.6(__libc_free+0x17) [0x7fc63dd1f777]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd) [0x55ac6385c3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4) [0x55ac6387b8e4]
/lib64/libc.so.6(+0x1a290) [0x7fc63dcb6290]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3aec0) [0x55ac6383aec0]
/lib64/libc.so.6(+0x1a290) [0x7fc63dcb6290]
/lib64/libc.so.6(+0x7a9a2) [0x7fc63dd169a2]
/lib64/libc.so.6(+0x6ec3c) [0x7fc63dd0ac3c]
/lib64/libc.so.6(clock_nanosleep+0x32) [0x7fc63dd5aba2]
/lib64/libc.so.6(nanosleep+0x17) [0x7fc63dd66b77]
/lib64/libc.so.6(usleep+0x4a) [0x7fc63dd9117a]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf) [0x55ac63851adf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784) [0x55ac6381e784]
/lib64/libc.so.6(+0x35b5) [0x7fc63dc9f5b5]
/lib64/libc.so.6(__libc_start_main+0x88) [0x7fc63dc9f668]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a) [0x55ac6381aa3a]

Exiting...
08:06:30 (1828): wrapper (7.17.26016): starting
08:06:30 (1828): wrapper (7.17.26016): starting
08:06:30 (1828): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc/slots/3/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
05:29:00 (1828): cmdock exited; CPU time 75430.489134
05:29:00 (1828): called boinc_finish(0)

</stderr_txt>
]]>


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