Task 99988117

Name ebola_RdRp_v1_sidock_00691962_r2_s-24.0_1
Workunit 70309862
Created 13 Mar 2026, 0:01:33 UTC
Sent 14 Mar 2026, 11:36:25 UTC
Report deadline 18 Mar 2026, 11:36:25 UTC
Received 16 Mar 2026, 0:14:39 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 83492
Run time 1 days 11 hours 44 min 34 sec
CPU time 1 days 11 hours 41 min 16 sec
Validate state Valid
Credit 649.71
Device peak FLOPS 2.21 GFLOPS
Application version CurieMarieDock 0.2.0 long tasks v2.02
x86_64-pc-linux-gnu
Peak working set size 234.83 MB
Peak swap size 247.13 MB
Peak disk usage 20.25 MB

Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
13:16:55 (27801): wrapper (7.17.26016): starting
13:16:56 (27801): wrapper (7.17.26016): starting
13:16:56 (27801): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc/slots/12/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
SIGSEGV: segmentation violation
Stack trace (16 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c) [0x55952e23ff8c]
/lib/x86_64-linux-gnu/libc.so.6(+0x3fdf0) [0x7f83e890cdf0]
/lib/x86_64-linux-gnu/libc.so.6(__libc_free+0x22) [0x7f83e8970262]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd) [0x55952e25c3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4) [0x55952e27b8e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x3fdf0) [0x7f83e890cdf0]
/lib/x86_64-linux-gnu/libc.so.6(+0x9a9ee) [0x7f83e89679ee]
/lib/x86_64-linux-gnu/libc.so.6(+0x8f668) [0x7f83e895c668]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0x2a) [0x7f83e89a8f7a]
/lib/x86_64-linux-gnu/libc.so.6(nanosleep+0x13) [0x7f83e89b4393]
/lib/x86_64-linux-gnu/libc.so.6(usleep+0x43) [0x7f83e89dd373]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf) [0x55952e251adf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784) [0x55952e21e784]
/lib/x86_64-linux-gnu/libc.so.6(+0x29ca8) [0x7f83e88f6ca8]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x85) [0x7f83e88f6d65]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a) [0x55952e21aa3a]

Exiting...
21:43:03 (3034): wrapper (7.17.26016): starting
21:43:03 (3034): wrapper (7.17.26016): starting
21:43:03 (3034): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc/slots/12/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
01:14:30 (3034): cmdock exited; CPU time 98932.123282
01:14:30 (3034): called boinc_finish(0)

</stderr_txt>
]]>


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